Factsheet for HORVU2Hr1G114330.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G517600.1	Wheat	mitochondrion	63.57	96.22
TraesCS2A01G516100.1	Wheat	mitochondrion	63.39	95.95
TraesCS2B01G544700.1	Wheat	mitochondrion	63.21	95.68
Solyc07g007640.1.1	Tomato	cytosol	26.79	63.29
VIT_11s0118g00280.t01	Wine grape	mitochondrion	30.0	59.36
EES12962	Sorghum	plastid	58.75	58.23
Zm00001d002086_P001	Maize	plastid	57.5	57.19
Os04t0647300-01	Rice	nucleus	58.75	55.67
GSMUA_Achr7P17050_001	Banana	plastid	39.46	42.34
KRH20191	Soybean	plastid	44.82	42.26
KRH03615	Soybean	cytosol	44.64	42.23
VIT_11s0118g00290.t01	Wine grape	nucleus	16.96	26.99
HORVU4Hr1G078590.1	Barley	cytosol	16.61	25.41
HORVU2Hr1G079230.7	Barley	mitochondrion	17.14	23.19
HORVU6Hr1G050090.1	Barley	nucleus, plastid	16.79	23.04
HORVU1Hr1G077630.2	Barley	plastid	17.32	14.95
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	17.32	13.16
HORVU6Hr1G067180.4	Barley	nucleus	17.32	13.13
HORVU7Hr1G030300.1	Barley	nucleus	18.93	11.4
HORVU2Hr1G022340.2	Barley	cytosol	14.82	10.94
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	16.96	9.57
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	17.86	9.51

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.90.70.10	UniProt:A0A287JIA0	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:HORVU2Hr1G114330	EnsemblPlants:HORVU2Hr1G114330.1	InterPro:IPR028889
PFAM:PF00443	PFscan:PS50235	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	UniParc:UPI000B484D04	InterPro:USP_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:731685263..731689104

Molecular Weight (calculated)

42911.8 Da

IEP (calculated)

7.769

GRAVY (calculated)

-0.294

Length

560 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXLNN LGNTCFMNSV
201: LQALLHAPPL RNYFLGDRHN RFLCPRRTPM RHRTTDAEAK AACLACDLDE IYSATFSGER TPYSPAKFLY SWWQHATNLA SYEQQDAHEF FISILDHIHE
301: NIKDDQPKSH EQGDGDCCIA HRVFSGILRS DVICTNCGFS STTFEPCMDV SLDLDSGHNN CLGVANPKPH ARNGMSSKVS TLMRCLERFT RAERLDAEQK
401: YFCERCKERQ VSLKQMSIRR LPLVSCFHIK RFEHSTVKKM SRKVDHSLQF PFSLDMTPYL SSSILRSRYG NRIFPSEACD SDAVSELPSE FEIFAVITHS
501: GKLDAGHYVT YLRLNNQWYR CDDAWVTRVD EHTVRSSQAY MLFYVQKTLY YKACERAAAV

Best Arabidopsis Sequence Match ( AT5G10790.2 )
(BLAST)

001: MSVKSGADVV AVRSNKKRRL DSQLIIGSNF LVSPRDRREK WTFPLGLRGL NNLGSTCFMN AVLQALVHAP PLRNFWLSGQ HNRDLCPRRT MGLLCLPCDL
101: DVIFSAMFSG DRTPYSPAHL LYSWWQHSTN LATYEQQDSH EFFISLLDRI HENEGKSKCL YQDNEECQCI THKAFSGLLR SDVTCTTCGS TSTTYDPFID
201: ISLTLDSMNG FSPADCRKNR YSGGPSVNAI MPTLSGCLDF FTRSEKLGPD QKLNCQSCGE KRESSKQMSI RRLPLLLCLH VKRFEHSLTR KTSRKIDSYL
301: QYPFRLNMSP YLSSSIIGKR FGNRIFAFDG EGEYDSSSSS SPSAEFEIFA VVTHKGMLES GHYVTYLRLK GLWYRCDDAW INEVEEEVVR GCECYMLFYA
401: QETVIQKAHK ELSYQVISMA DAFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.