Factsheet for HORVU5Hr1G069620.20

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110110.2
HORVU4Hr1G011500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24560.1	HORVU2Hr1G110110.2	AT4G13930.1	23232097
AT4G24560.1	HORVU4Hr1G011500.1	AT4G37930.1	23232097

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G243400.1	Wheat	vacuole	82.77	66.59
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	79.65	64.86
TraesCS5A01G246000.3	Wheat	vacuole	82.77	63.41
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	62.42	49.57
Zm00001d020769_P005	Maize	nucleus	53.32	45.91
OQU89635	Sorghum	vacuole	52.51	42.43
GSMUA_Achr10P...	Banana	nucleus	23.07	41.87
GSMUA_Achr7P19010_001	Banana	nucleus	25.24	40.43
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	52.37	38.87
GSMUA_Achr5P22990_001	Banana	vacuole	39.48	32.37
AT5G65450.2	Thale cress	endoplasmic reticulum, golgi, mitochondrion, nucleus	32.7	32.13
CDY14564	Canola	golgi	32.84	31.76
CDY08792	Canola	vacuole	32.16	31.64
Bra024386.1-P	Field mustard	golgi	32.56	31.29
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	30.53	30.41
GSMUA_Achr10P...	Banana	golgi	17.91	29.33
VIT_00s0199g00030.t01	Wine grape	vacuole	35.01	28.57
KRH74502	Soybean	golgi, plasma membrane, vacuole	35.28	28.05
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	14.65	27.98
KRH69660	Soybean	golgi	35.28	27.72
KRH16837	Soybean	golgi	38.26	26.99
KRH72452	Soybean	golgi, plasma membrane	36.91	26.25
KRH52893	Soybean	extracellular, golgi, vacuole	31.61	26.24
Solyc04g076210.2.1	Tomato	nucleus	38.67	25.93
CDY11021	Canola	golgi	34.74	25.37
Bra019219.1-P	Field mustard	golgi	34.74	25.3
CDX92643	Canola	golgi	34.74	25.27
CDY03441	Canola	golgi	34.33	24.98
AT4G24560.1	Thale cress	extracellular, golgi	33.79	24.7
HORVU4Hr1G078590.1	Barley	cytosol	12.21	24.59
CDY34291	Canola	golgi	33.92	24.51
KRH62182	Soybean	golgi, vacuole	37.72	24.43
Bra013814.1-P	Field mustard	golgi	33.79	24.41
VIT_18s0001g07370.t01	Wine grape	golgi, vacuole	40.43	24.33
HORVU6Hr1G050090.1	Barley	nucleus, plastid	12.08	21.81
HORVU2Hr1G079230.7	Barley	mitochondrion	12.08	21.5
HORVU1Hr1G077630.2	Barley	plastid	17.37	19.72
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	25.92	18.17
HORVU2Hr1G114330.1	Barley	cytosol	13.16	17.32
HORVU6Hr1G067180.4	Barley	nucleus	16.15	16.1
HORVU7Hr1G030300.1	Barley	nucleus	19.13	15.16
HORVU2Hr1G022340.2	Barley	cytosol	12.08	11.73

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.90.70.10	UniProt:A0A287RNU5	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:HORVU5Hr1G069620	EnsemblPlants:HORVU5Hr1G069620.20	InterPro:IPR028889
PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
UniParc:UPI000B47C6C4	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:523887964..523892316

Molecular Weight (calculated)

81665.4 Da

IEP (calculated)

7.135

GRAVY (calculated)

-0.610

Length

737 amino acids

Sequence
(BLAST)

001: VKCQIAHWRQ GHKDECHPLS ADAREDTTIK ASSTKKIERT SSDEESVVTG VEQAVESKEM PLEKASNTSE ASQHDGAEFT FPQVTGHAES ADCSGSPTFG
101: KSCKVEGASV IENGSHTQIP VACDPSEKAD DLPESSVKSE IRVVVPDNLP TTKSLIRQQT APTVVRHYPS ESTLFPYELF VKLYNFDKVE LRPFGLCNLG
201: NSCYANVVLQ CLAFTRPLTA YFLEGLHSKK CSQKEWCFLC EFEKLIVEGK QGQSQLSPTG ILSHLSDIGN SFGPGKEEDA HEFLSTYMWS CKRYAIDTMQ
301: SASMKEANAN GAHKLSEETT LIQLMFGGYL RSKIKCTKCG VSSEHCERIL DLTVEIDGDI STLEEALHRF TSSEVLDGDN RYHCTRCKTY ERGKKKLTIS
401: EAPNILTIAL KRYQSGMFGK INKAIRFPEY LNLSSYMSAT DDCSPVYRLY AVVVHRDVMD SSVSGHYVCY VKDSQGKWYE KRYLQVKRVS LKNVRSECAY
501: MLLYARCSPR APRSLRKLII GQGLSHTKKA RKTTDPEPTC SEGQSYFSRH QGAQSQSCRD HAVNGHTYRL VNNTLNPVLE STSTSEDSSL FSHSDAGSSG
601: NLSSDNTDST TNPGGSKEYA YISGSSDQMH PLSRVVSPQE HSRQMSSLNP SSSTQYADQG EVDKLQQLKH QASKGVWDEG CEGPAFFYVD QGKYSNSSSR
701: HRCSISSSSS CNLTGQRGRR MVGEVDHGPA EGQGHFK

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.