Factsheet for HORVU2Hr1G079230.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G340100.1	Wheat	cytosol	88.16	98.65
Os04t0452400-01	Rice	nucleus	86.23	97.28
EES12269	Sorghum	cytosol	85.51	96.2
Zm00001d003476_P002	Maize	cytosol	85.51	96.2
Zm00001d025570_P003	Maize	nucleus	85.02	95.65
GSMUA_Achr10P...	Banana	cytosol	74.88	89.86
VIT_07s0141g00230.t01	Wine grape	nucleus	77.05	86.45
KRG97572	Soybean	nucleus	76.33	85.64
KRH31299	Soybean	nucleus	76.09	85.37
PGSC0003DMT400032703	Potato	nucleus	75.12	84.97
KRH59329	Soybean	nucleus	75.6	84.82
GSMUA_Achr8P14390_001	Banana	cytosol	74.88	84.7
KRH43175	Soybean	nucleus	75.36	84.55
Solyc04g056290.2.1	Tomato	nucleus	75.12	84.28
GSMUA_Achr7P19160_001	Banana	mitochondrion	60.63	82.3
GSMUA_Achr10P...	Banana	nucleus	73.43	81.28
HORVU4Hr1G078590.1	Barley	cytosol	71.26	80.6
VIT_09s0070g00500.t01	Wine grape	golgi, mitochondrion, nucleus, peroxisome	65.7	75.98
HORVU6Hr1G050090.1	Barley	nucleus, plastid	71.5	72.55
HORVU2Hr1G114330.1	Barley	cytosol	23.19	17.14
HORVU1Hr1G077630.2	Barley	plastid	22.22	14.18
HORVU6Hr1G067180.4	Barley	nucleus	21.74	12.18
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	21.5	12.08
HORVU2Hr1G022340.2	Barley	cytosol	21.74	11.86
HORVU7Hr1G030300.1	Barley	nucleus	22.95	10.22
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	23.91	9.97
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	23.19	9.13

Protein Annotations

MapMan:19.2.3.1.1.2	Gene3D:3.90.70.10	UniProt:A0A287IKN1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:HORVU2Hr1G079230	EnsemblPlants:HORVU2Hr1G079230.7	InterPro:IPR028889
PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR43942	PANTHER:PTHR43942:SF2
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000B471915	InterPro:USP_CS	InterPro:USP_dom
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:573593867..573598441

Molecular Weight (calculated)

46776.4 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.439

Length

414 amino acids

Sequence
(BLAST)

001: LHKFPVRAPS RSALASSAAE RSRSGLGSGF RYLTGAATGW WDRWMVMGAS GSKLEKALGD QFPEGERYFG LENFGNTCYC NSVLQALYFC TPFREQLLEY
101: YTNNKNPGDA EENLLTCLAD LFMQVSQSKK KTGVIAPKRF VQRVKKQNEL FRSYMHQDAH EFLNFLLNEL VDILEKESSA AKDSPQSSSP EKVPNGPVQP
201: LANGVKKEPP VTLVHKNFQG ILTNETKCLR CETVTARDET FFDLSVDIEQ NSSITSCLKN FSSTETLNAE DKFFCDKCCS LQEAQKRMKI KKAPHILVIH
301: LKRFKYIEQL GRYKKLSYRV VFPMELKMGS TSDDVDTEYS LFAVVVHVGS GPNHGHYVSL VKSHNHWLFF DDENVEMVEE STLQTFFGSS HEYSGNTDHG
401: YILFYEGLGG KSLG

Best Arabidopsis Sequence Match ( AT2G22310.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEHYANNKA DAEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN
101: ELFRSYMHQD AHEFLNYLLN ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR CLRCETVTAR DETFLDLSLD
201: IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV
301: HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE SLGTR

Arabidopsis Description

UBP4UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.