Factsheet for GSMUA_Achr8P14390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	87.16	92.46
VIT_07s0141g00230.t01	Wine grape	nucleus	87.16	86.45
KRH59329	Soybean	nucleus	86.61	85.91
Os04t0452400-01	Rice	nucleus	86.07	85.83
PGSC0003DMT400032703	Potato	nucleus	85.79	85.79
KRG97572	Soybean	nucleus	86.34	85.64
KRH43175	Soybean	nucleus	86.34	85.64
EES12269	Sorghum	cytosol	86.07	85.6
KRH31299	Soybean	nucleus	85.79	85.09
Zm00001d003476_P002	Maize	cytosol	85.52	85.05
GSMUA_Achr7P19160_001	Banana	mitochondrion	70.49	84.59
Zm00001d025570_P003	Maize	nucleus	84.97	84.51
Solyc01g105240.2.1	Tomato	nucleus	84.43	84.43
AT2G22310.1	Thale cress	nucleus	83.61	83.84
CDY13770	Canola	nucleus	81.15	83.43
TraesCS2A01G340100.1	Wheat	cytosol	84.15	83.24
Bra038533.1-P	Field mustard	nucleus	80.6	83.1
AT4G39910.1	Thale cress	nucleus	84.15	83.02
GSMUA_Achr10P...	Banana	nucleus	84.7	82.89
CDY68864	Canola	nucleus	83.88	82.53
Bra010647.1-P	Field mustard	nucleus	83.88	82.53
CDX69375	Canola	nucleus	83.61	82.48
CDX76934	Canola	nucleus	79.51	82.2
Zm00001d028005_P001	Maize	nucleus	81.69	81.69
Os03t0190800-01	Rice	cytosol	81.42	81.42
EER92723	Sorghum	nucleus	81.15	81.15
HORVU4Hr1G078590.1	Barley	cytosol	79.51	79.51
TraesCS4A01G406600.1	Wheat	cytosol	79.51	79.51
TraesCS4B01G306100.1	Wheat	cytosol	79.23	79.23
TraesCS7D01G125700.1	Wheat	nucleus	78.96	78.96
TraesCS4D01G304300.1	Wheat	cytosol	78.96	78.96
CDY63898	Canola	nucleus	83.33	76.63
HORVU2Hr1G079230.7	Barley	mitochondrion	84.7	74.88
Bra011823.1-P	Field mustard	nucleus	82.79	68.71
GSMUA_Achr7P19170_001	Banana	cytosol	24.59	67.16
Zm00001d016918_P001	Maize	plastid	76.23	66.91
EES07024	Sorghum	mitochondrion	76.23	66.59
TraesCS6A01G203500.1	Wheat	nucleus, plastid	74.04	66.42
TraesCS6D01G187000.1	Wheat	nucleus, plastid	73.77	66.18
HORVU6Hr1G050090.1	Barley	nucleus, plastid	73.77	66.18
Os02t0573400-01	Rice	nucleus	72.4	63.86
TraesCS6B01G223900.1	Wheat	plastid	72.4	63.25
CDY68683	Canola	endoplasmic reticulum, vacuole	83.88	63.04
GSMUA_Achr7P05330_001	Banana	cytosol	21.86	25.08
GSMUA_Achr1P11380_001	Banana	cytosol	24.86	24.4
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	22.4	23.3
GSMUA_Achr8P09770_001	Banana	cytosol	24.59	21.03
GSMUA_Achr7P05090_001	Banana	vacuole	25.41	19.91
GSMUA_Achr7P17050_001	Banana	plastid	24.04	16.86
GSMUA_Achr3P04660_001	Banana	nucleus	25.14	15.33
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	23.5	14.68
GSMUA_Achr9P10330_001	Banana	mitochondrion	24.86	14.61
GSMUA_Achr7P19010_001	Banana	nucleus	17.21	13.7
GSMUA_Achr10P...	Banana	nucleus	15.03	13.55
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	26.78	11.69
GSMUA_Achr5P22990_001	Banana	vacuole	28.42	11.57
GSMUA_Achr2P20080_001	Banana	plasma membrane	27.05	10.52
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	25.68	10.15
GSMUA_Achr4P01920_001	Banana	nucleus	26.23	9.94
GSMUA_AchrUn_...	Banana	golgi, vacuole	26.5	9.58
GSMUA_Achr10P...	Banana	golgi	10.93	8.89
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	9.29	8.81
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	20.22	8.72
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	25.68	8.31

Protein Annotations

MapMan:19.2.3.1.1.2	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:GSMUA_Achr8G14390_001	EnsemblPlants:GSMUA_Achr8P14390_001	EnsemblPlants:GSMUA_Achr8T14390_001	InterPro:IPR028889
UniProt:M0TQE2	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR43942
PANTHER:PTHR43942:SF2	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI00029594A9	InterPro:USP_CS
InterPro:USP_dom	:	:	:	:	:

Description

Ubiquitin carboxyl-terminal hydrolase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14390_001]

Coordinates

chr8:-:11103383..11108428

Molecular Weight (calculated)

41917.1 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.360

Length

366 amino acids

Sequence
(BLAST)

001: MGAAGSKLEK VLGDQFPEGE RYFGLENFGN TCYCNSVLQA LYFCIPFREQ LLDYYANNKN LGDAEENLLM CLADLFSQIS SQKKKTGVIA PKRFVYRVKK
101: QNEIFRGYMH QDAHEFLNFL LNELVDILEK ESNALKSPPE ALSPSEKISN GPSHPVMNGV RKEPIVTWVH KNFQGILTNE TRCLCCETVT ARDEMFFDLS
201: LDIEQNSSIT SCLKNFCSTE TLNAEDKFFC DKCCSLQEAQ KRMKIKKPPH ILVIHLKRFK YMEQLGRYKK LSYRVVFPME LKLNTAEDAD SEYILFAVVV
301: HVGSGPNHGH YVSLVKSHNH WLMFDDDNIE MIDESTVQTF FGSSQEYPGN TDHGYILFYE CLGGKS

Best Arabidopsis Sequence Match ( AT2G22310.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEHYANNKA DAEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN
101: ELFRSYMHQD AHEFLNYLLN ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR CLRCETVTAR DETFLDLSLD
201: IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV
301: HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE SLGTR

Arabidopsis Description

UBP4UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.