Factsheet for GSMUA_Achr7P19170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	70.9	27.54
GSMUA_Achr8P14390_001	Banana	cytosol	67.16	24.59
GSMUA_Achr10P...	Banana	nucleus	66.42	23.8
CDY50263	Canola	cytosol	47.76	23.62
GSMUA_Achr7P19160_001	Banana	mitochondrion	18.66	8.2
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	20.15	6.99
GSMUA_Achr1P11380_001	Banana	cytosol	19.4	6.97
GSMUA_Achr7P05330_001	Banana	cytosol	16.42	6.9
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	17.91	6.82
GSMUA_Achr10P...	Banana	golgi	21.64	6.44
GSMUA_Achr8P09770_001	Banana	cytosol	20.15	6.31
GSMUA_Achr7P05090_001	Banana	vacuole	21.64	6.21
GSMUA_Achr7P17050_001	Banana	plastid	23.13	5.94
GSMUA_Achr3P04660_001	Banana	nucleus	24.63	5.5
GSMUA_Achr9P10330_001	Banana	mitochondrion	23.13	4.98
GSMUA_Achr5P22990_001	Banana	vacuole	29.1	4.34
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	26.12	4.18
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	17.91	4.1
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	27.61	4.0
GSMUA_Achr2P20080_001	Banana	plasma membrane	27.61	3.93
GSMUA_Achr4P01920_001	Banana	nucleus	24.63	3.42
GSMUA_AchrUn_...	Banana	golgi, vacuole	25.37	3.36
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	20.9	2.48
GSMUA_Achr7P19010_001	Banana	nucleus	7.46	2.17
GSMUA_Achr10P...	Banana	nucleus	5.97	1.97
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	7.46	1.18

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:GSMUA_Achr7G19170_001	EnsemblPlants:GSMUA_Achr7P19170_001	EnsemblPlants:GSMUA_Achr7T19170_001	InterPro:IPR028889
UniProt:M0TIV4	PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235	PANTHER:PTHR43942	PANTHER:PTHR43942:SF8
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000294B09E	InterPro:USP_CS	InterPro:USP_dom

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G19170_001]

Coordinates

chr7:-:21961223..21964181

Molecular Weight (calculated)

15397.8 Da

IEP (calculated)

5.669

GRAVY (calculated)

0.161

Length

134 amino acids

Sequence
(BLAST)

001: MVMGAAGSKL EKALGDQFPE GEHYFGLENF GNTCYCNSVL QALYFCIPFR EQLLYYYSNN KNLGDVEENL LTCLADLFTQ VNKIFITNLQ NIMPNLQKPL
101: MSFLLNKSCC ITKFECIFLV HLFWNFAYSG TLLK

Best Arabidopsis Sequence Match ( AT4G39910.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K

Arabidopsis Description

UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.