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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • nucleus 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr6P06520_001
GSMUA_Achr8P00310_001
GSMUA_Achr9P01620_001
GSMUA_Achr9P07310_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24560.1 GSMUA_Achr6P06520_001 AT4G13930.1 23232097
AT4G24560.1 GSMUA_Achr8P00310_001 AT4G13930.1 23232097
AT4G24560.1 GSMUA_Achr9P01620_001 AT4G13930.1 23232097
AT4G24560.1 GSMUA_Achr9P07310_001 AT4G13930.1 23232097
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana nucleus 63.91 72.41
Zm00001d050489_P001 Maize nucleus 46.09 46.39
OQU80649 Sorghum nucleus 46.09 26.3
HORVU5Hr1G069620.20 Barley cytosol, nucleus 40.43 25.24
GSMUA_Achr7P05090_001 Banana vacuole 25.43 25.05
GSMUA_Achr5P22990_001 Banana vacuole 47.39 24.25
GSMUA_AchrUn_... Banana golgi, vacuole 49.13 22.31
Os09t0464400-00 Rice endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 44.57 22.09
Zm00001d020769_P005 Maize nucleus 40.0 21.5
OQU89635 Sorghum vacuole 41.96 21.16
GSMUA_Achr7P19160_001 Banana mitochondrion 13.91 20.98
TraesCS5D01G252600.2 Wheat endoplasmic reticulum, vacuole 40.87 20.77
Os08t0478500-01 Rice plastid 43.91 20.65
TraesCS5B01G243400.1 Wheat vacuole 40.87 20.52
TraesCS7A01G282200.4 Wheat plastid 43.91 20.42
HORVU7Hr1G064340.3 Barley endoplasmic reticulum 43.91 20.34
TraesCS7B01G179000.2 Wheat plastid 43.48 20.14
TraesCS7D01G280800.4 Wheat plastid 42.83 19.86
VIT_00s0407g00030.t01 Wine grape golgi, vacuole 31.52 19.59
TraesCS5A01G246000.3 Wheat vacuole 40.87 19.54
VIT_00s0199g00030.t01 Wine grape vacuole 38.26 19.49
AT5G65450.2 Thale cress endoplasmic reticulum, golgi, mitochondrion, nucleus 30.65 18.8
CDY08792 Canola vacuole 30.43 18.69
GSMUA_Achr10P... Banana cytosol 13.91 18.55
CDY14564 Canola golgi 30.65 18.5
GSMUA_Achr4P19070_001 Banana cytosol, golgi, mitochondrion, plastid 14.13 18.47
Bra024386.1-P Field mustard golgi 30.65 18.38
KRH74502 Soybean golgi, plasma membrane, vacuole 36.74 18.23
KRH69660 Soybean golgi 37.17 18.23
GSMUA_Achr10P... Banana nucleus 14.13 17.38
GSMUA_Achr8P14390_001 Banana cytosol 13.7 17.21
Solyc04g076210.2.1 Tomato nucleus 39.78 16.65
KRH72452 Soybean golgi, plasma membrane 37.39 16.6
GSMUA_Achr3P03560_001 Banana endoplasmic reticulum, plasma membrane, vacuole 29.57 16.23
KRH16837 Soybean golgi 36.74 16.17
KRH62182 Soybean golgi, vacuole 39.78 16.08
CDY11021 Canola golgi 35.22 16.06
Bra019219.1-P Field mustard golgi 34.78 15.81
CDY03441 Canola golgi 34.78 15.79
CDX92643 Canola golgi 34.57 15.7
CDY34291 Canola golgi 34.78 15.69
Bra013814.1-P Field mustard golgi 34.78 15.69
VIT_18s0001g07370.t01 Wine grape golgi, vacuole 41.74 15.67
AT4G24560.1 Thale cress extracellular, golgi 34.13 15.58
GSMUA_Achr7P05330_001 Banana cytosol 10.65 15.36
GSMUA_Achr1P11380_001 Banana cytosol 12.39 15.28
KRH52893 Soybean extracellular, golgi, vacuole 28.91 14.98
GSMUA_Achr3P04660_001 Banana nucleus 19.35 14.83
GSMUA_Achr9P10330_001 Banana mitochondrion 19.35 14.29
GSMUA_Achr2P20080_001 Banana plasma membrane 28.91 14.13
GSMUA_Achr3P17560_001 Banana endoplasmic reticulum, golgi 28.26 14.04
GSMUA_Achr8P09770_001 Banana cytosol 12.61 13.55
GSMUA_Achr5P13990_001 Banana endoplasmic reticulum 17.17 13.48
GSMUA_Achr1P10260_001 Banana endoplasmic reticulum, plasma membrane 31.09 12.64
GSMUA_Achr6P01970_001 Banana nucleus, plastid 21.09 11.43
GSMUA_Achr7P17050_001 Banana plastid 10.87 9.58
GSMUA_Achr4P01920_001 Banana nucleus 19.35 9.21
GSMUA_Achr7P19170_001 Banana cytosol 2.17 7.46
GSMUA_Achr10P... Banana golgi 5.65 5.78
GSMUA_Achr7P19020_001 Banana endoplasmic reticulum, golgi 0.0 0.0
Protein Annotations
MapMan:19.2.3.1.1.7Gene3D:3.90.70.10GO:GO:0003674GO:GO:0003824GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016579GO:GO:0016787GO:GO:0019538GO:GO:0036459
EnsemblPlantsGene:GSMUA_Achr7G19010_001EnsemblPlants:GSMUA_Achr7P19010_001EnsemblPlants:GSMUA_Achr7T19010_001InterPro:IPR028889UniProt:M0TIT8PFAM:PF00443
PFscan:PS50235PANTHER:PTHR45499InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C19_UCHSUPFAM:SSF54001UniParc:UPI00029620D1
InterPro:USP_domSEG:seg::::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G19010_001]
Coordinates
chr7:-:21806996..21810670
Molecular Weight (calculated)
51779.0 Da
IEP (calculated)
7.257
GRAVY (calculated)
-0.594
Length
460 amino acids
Sequence
(BLAST)
001: MQSACLKEAR KKPDGLLADE TTLIQQIFGG YLRSKIRCSR CKGKSERCER MMDVTVEIDG NIATLDEALL RFTSIEILDG ENKYECDRCK SYERAKKRLT
101: ILEAPNVLTI VLKRFQSGKF GKLNKDVRFP EYLNLAPYMS GDDKSPVYRL YAVIVHIDVM NASFSGHYVC YVKDTQGKWY ETNDSEVKPM ELDKVLSKGA
201: YMLLYARCSP RAPSSVRKAM AQDLPHAKKP RSKEIKGKPG GASVAHYLYP PRIIGDQSSS HSSDMLSERL RLPLIDSSSD SSSLFDEGSS CSTESTRDST
301: SFEEYWEHMS GESDSINLNS PLRIFEDSDG FAHSPRGSVR SSKAVLNGSL PDLPSSNDSG SNASCSGRET NQVEAERYDR IKHDSNGNPS SLYSDEREHC
401: INSTEHTRTL VTDWISPNNV KSALIFSEST KDYIHYMFDN TLSKVLLLSF NFLIMNKRYS
Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.