Factsheet for Os09t0464400-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, golgi, plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, secretory
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0738400-01
Os11t0455800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24560.1	Os11t0455800-01	AT4G13930.1	23232097
AT4G24560.1	Os03t0738400-01	AT4G37930.1	23232097

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	49.57	62.42
TraesCS5B01G243400.1	Wheat	vacuole	55.6	56.33
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	54.09	55.47
TraesCS5A01G246000.3	Wheat	vacuole	55.6	53.64
Zm00001d020769_P005	Maize	nucleus	49.25	53.39
OQU89635	Sorghum	vacuole	49.14	50.0
Os08t0478500-01	Rice	plastid	52.59	49.9
GSMUA_Achr10P...	Banana	nucleus	21.55	49.26
GSMUA_Achr7P19010_001	Banana	nucleus	22.09	44.57
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	16.27	39.12
GSMUA_Achr5P22990_001	Banana	vacuole	37.39	38.6
AT5G65450.2	Thale cress	endoplasmic reticulum, golgi, mitochondrion, nucleus	30.06	37.2
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	28.88	36.22
GSMUA_Achr10P...	Banana	golgi	17.35	35.78
CDY08792	Canola	vacuole	28.77	35.65
CDY14564	Canola	golgi	29.2	35.56
Bra024386.1-P	Field mustard	golgi	28.99	35.07
VIT_00s0199g00030.t01	Wine grape	vacuole	33.62	34.55
KRH74502	Soybean	golgi, plasma membrane, vacuole	33.3	33.33
KRH69660	Soybean	golgi	33.41	33.05
KRH16837	Soybean	golgi	35.99	31.96
KRH72452	Soybean	golgi, plasma membrane	35.02	31.37
KRH52893	Soybean	extracellular, golgi, vacuole	28.77	30.07
CDY03441	Canola	golgi	31.57	28.92
KRH62182	Soybean	golgi, vacuole	35.45	28.91
CDY11021	Canola	golgi	31.25	28.74
Bra019219.1-P	Field mustard	golgi	31.25	28.66
Bra013814.1-P	Field mustard	golgi	31.25	28.43
CDY34291	Canola	golgi	31.25	28.43
AT4G24560.1	Thale cress	extracellular, golgi	30.6	28.17
CDX92643	Canola	golgi	30.71	28.13
Solyc04g076210.2.1	Tomato	nucleus	33.3	28.12
VIT_18s0001g07370.t01	Wine grape	golgi, vacuole	36.42	27.59
Os04t0452400-01	Rice	nucleus	9.91	25.07
Os03t0190800-01	Rice	cytosol	9.81	24.86
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	25.86	24.62
Os02t0573400-01	Rice	nucleus	10.88	24.34
Os06t0654000-01	Rice	cytosol, nucleus	21.44	21.08
Os05t0510300-01	Rice	plastid	14.12	20.34
Os07t0661300-01	Rice	cytosol, plasma membrane	9.7	18.4
Os04t0647300-01	Rice	nucleus	10.78	16.92
Os06t0184300-01	Rice	mitochondrion	14.33	14.39
Os02t0795000-01	Rice	nucleus	14.22	11.14

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	UniProt:A0A0P0XPE6	ProteinID:BAT08510.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893	InterPro:IPR028889
EnsemblPlantsGene:Os09g0464400	EnsemblPlants:Os09t0464400-00	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360
PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232
SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI000393B2D4	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND
SEG:seg	:	:	:	:	:

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 domain containing protein. (Os09t0464400-00)

Coordinates

chr9:-:17600530..17608513

Molecular Weight (calculated)

102186.0 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.496

Length

928 amino acids

Sequence
(BLAST)

001: MASAALSLAV AVVAVAVAAV VAVARGALRR AAARREEVRR LARLAAVEAE VAEREAYCYA RGRGGVAGAP LWTVPEVASP REDEEEEEEE EAAAVELEMP
101: AARQAEAAAA AAAVKGVCVV CRRPTTFRCK RCKGVKYCTF KCQISHWRQG HKDECHPPRV DARPDNITVV SSVKKGVGMY NSFEQSVKSS VEPAVEVNKS
201: VAAVPELSEA NLVSDGVDNE RKKMRGQKAS ITAKVSEDVL DNNRIRSVDS SRLPTSGKAC NIQDATVNEN FSKTSAGSSS SRVERSTTSE PELNHSNKQA
301: SGTDNLKSSR GLPSVSTVGT ISSIHGSEKE AAMPNNRSLV KNIPRQQAAA KVVRHYPSEM TLFPYEHFVK LYNFDKVELR PFGLVNLGNS CYANAVLQCL
401: AFTRPLTAYL TEGLHSRNCN LILSQNCVTY HGSKKEWCFM CEFEKLILEG RRGKSHLSPT GILSHLRDIG SSFGPGREED AHEFLRYAID TMQSASMKEA
501: KKNGVYGLPE ETTLIKCTMC QGSSEQCERI LDLTVEIDGD INTLEEALHR FTSTEILDGD NRYNCSRCKS YERAKKKLTI SEAPNILTIA LKRYQSGNFG
601: KINKAVRFTE YLNLSNYMST ADDISPVYQL YAVVVHHDVM NAAFSGHYVC YVKDTQGKWH KMDDSQVKPV SLEKVLSKCA YMLFYARCSP RAPNSVRKMI
701: LAQDSSCTKK AKQMVDPGPP SLEGGSYLSR HQGGQSCRDH IVYDLTYTFG GSSYTVVESP SPSDSSSLFS NSDAGSTSTF SSDSTDSTRN STSMEEYDYI
801: FGSSDQMYPV STVVIPEEHE LSYSRQRSSL NPSTSSQYVD QAAEVEMLHQ HQHQAGRGGW DEGDVMPFFY SNQGKHHDSS RSSNISSSNR KLTEQRRTIG
901: EVDHGPGEGH GSVLLRRAAR ERIAQAIY

Best Arabidopsis Sequence Match ( AT5G65450.1 )
(BLAST)

001: MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR PATVDYGGDS VSDVYRCAVC LYPTTTRCSQ CKSVRYCSSK CQILHWRRGH KEECRSPDYD
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D

Arabidopsis Description

UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.