Factsheet for Os06t0654000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20513	Sorghum	golgi, plasma membrane	61.97	59.94
GSMUA_Achr7P05090_001	Banana	vacuole	28.71	58.03
Zm00001d036707_P006	Maize	plasma membrane	58.79	57.93
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	62.18	55.85
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	61.76	55.0
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	61.76	54.74
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	61.33	53.86
PGSC0003DMT400076065	Potato	endoplasmic reticulum	18.86	51.15
Bra007837.1-P	Field mustard	nucleus	24.68	45.69
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	29.45	44.06
CDY45587	Canola	endoplasmic reticulum, vacuole	29.24	43.6
CDX75188	Canola	vacuole	28.18	43.54
Bra011290.1-P	Field mustard	vacuole	28.07	43.3
CDY20330	Canola	vacuole	29.24	42.92
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	28.5	42.63
CDY34761	Canola	endoplasmic reticulum, vacuole	29.03	42.55
KRH15706	Soybean	golgi, plasma membrane, vacuole	32.84	42.52
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	29.24	42.4
CDX68773	Canola	nucleus, plasma membrane	27.54	42.35
KRH05330	Soybean	golgi, plasma membrane	32.84	42.06
KRH61621	Soybean	golgi	32.94	41.91
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	29.45	41.37
KRH52289	Soybean	golgi	32.1	41.28
Solyc12g096430.1.1	Tomato	nucleus, plastid	26.91	40.84
Solyc08g069050.2.1	Tomato	extracellular	32.52	39.51
VIT_04s0069g00760.t01	Wine grape	nucleus	32.42	35.42
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	33.79	28.21
Os03t0190800-01	Rice	cytosol	10.59	27.32
Os04t0452400-01	Rice	nucleus	10.59	27.25
Os02t0573400-01	Rice	nucleus	10.17	23.13
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	22.67	21.95
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	21.08	21.44
Os08t0478500-01	Rice	plastid	21.82	21.06
Os05t0510300-01	Rice	plastid	13.03	19.1
Os07t0661300-01	Rice	cytosol, plasma membrane	9.64	18.61
Os04t0647300-01	Rice	nucleus	11.02	17.6
Os06t0184300-01	Rice	mitochondrion	16.1	16.45
Os02t0795000-01	Rice	nucleus	16.1	12.83

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.90.70.10	ProteinID:BAF20157.1	ProteinID:BAS98928.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872
InterPro:IPR028889	EnsemblPlantsGene:Os06g0654000	EnsemblPlants:Os06t0654000-01	PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235
PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	UniProt:Q0DAG6	SUPFAM:SSF54001	UniParc:UPI0000E128E5
InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:	:

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os06t0654000-01)

Coordinates

chr6:-:26785125..26790388

Molecular Weight (calculated)

103631.0 Da

IEP (calculated)

5.580

GRAVY (calculated)

-0.613

Length

944 amino acids

Sequence
(BLAST)

001: SQGCQSKHWQ SGHKFKCKQM KKSSPADKLS GGGEEDRNKL SGFGPISLVP ARRKLNKVIF PYDEFLKLCN WRDLDYLPCG LLNCGNSCFA NVVLQCLSCT
101: RPLAAYLLGM DHSRECYKRH EDWCFLCELQ CHIQRASESM HPFAPKNILS HLPNIGGNLG FGRQEDAHEF MRFAIDKMQS ACLDEFGGEK AVDPSTQETT
201: LIQHIFGGRL QSQVQCTACG MVSNRYENMM DLTVEIHGDA DSLEECLDKF TAVEWLDGDN KYKCDGCSDY VKAQKRLTVY QAPNILTITL KRFQSGRFGK
301: LNKRVTFPMK LDLTPYMSST DGSDQYDLYA VVVHLDMLNA SFFGHYICYI KNYRGRWYKI DDCKVMAVDE EEVHAQGAYM LLYSRRTARP RPLIAVEELM
401: KQQQQLKVCP LNGQNHLIQE DVPLEGVPSL KPSEDLEVDF ESNNKSLHTM DREPDLDFHV SFDRDKFTNN DIMHPPVSTV SHALDENTRG DSGFPLEESN
501: TMGSVQFGNS TYETSLVHSP AEQCEEPASC IDSVDYMEID TEAGVKVERW SRPALGDSVG VMGNGTLVPA LENGLAGKPI PGFPDKPSRI NSFFAEGCQT
601: GDNGAGSSQE LNGHCNGEPS CPEQGVLTNG GNTPSPSTQC YENKFATSTN GNYSIGNGDT LSSSNSLHAG KQNAGFTYNG FNPKPYKEPS GSNTYLNNTC
701: NGKPSEDNHN KCAPNLPAKD CQGGMPFLHR GFLLRPCSRG NPGKCDDGLS ISNGTSSSFV SSNSKSSNIS SSRNGEGGTP FLSPSFRTNH CRESAAMDTS
801: ASSVHDLKTS YNISLEQKSI GAAVPSDLIK ESWGEDGTTF GTVYQQRATS VDNVSSRHDE NGHVILGANN SSYGGENGSN NGILDMNSSS SQRDAASSTM
901: MASEKGIGPK TADQVNYISD ALEHDGLRRR LTSNFPDQNG IDAQ

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.