Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 43.63 | 97.41 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 39.51 | 65.74 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 43.63 | 53.72 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 43.5 | 53.4 |
| CDY20330 | Canola | vacuole | 43.76 | 52.88 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 42.99 | 51.86 |
| Bra007837.1-P | Field mustard | nucleus | 33.98 | 51.76 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 42.86 | 51.15 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 41.31 | 50.87 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 43.11 | 49.85 |
| KRH61621 | Soybean | golgi | 47.49 | 49.73 |
| KRH52289 | Soybean | golgi | 46.46 | 49.18 |
| CDX75188 | Canola | vacuole | 38.48 | 48.94 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 45.82 | 48.83 |
| CDX68773 | Canola | nucleus, plasma membrane | 38.35 | 48.53 |
| Bra011290.1-P | Field mustard | vacuole | 38.22 | 48.53 |
| KRH05330 | Soybean | golgi, plasma membrane | 45.82 | 48.3 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 37.32 | 46.62 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 46.46 | 41.78 |
| Zm00001d036707_P006 | Maize | plasma membrane | 40.54 | 32.88 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 39.51 | 32.52 |
| KXG20513 | Sorghum | golgi, plasma membrane | 40.67 | 32.38 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 44.02 | 30.24 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 40.54 | 29.97 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 40.67 | 29.81 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 40.67 | 29.67 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 40.28 | 29.12 |
| Solyc04g056290.2.1 | Tomato | nucleus | 12.23 | 25.75 |
| Solyc01g105240.2.1 | Tomato | nucleus | 11.97 | 25.41 |
| Solyc09g015600.1.1 | Tomato | extracellular | 9.91 | 24.68 |
| Solyc09g015580.1.1 | Tomato | vacuole | 9.78 | 24.44 |
| Solyc08g048410.1.1 | Tomato | cytosol | 5.15 | 23.95 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 28.83 | 23.19 |
| Solyc07g007640.1.1 | Tomato | cytosol | 6.56 | 21.52 |
| Solyc08g023360.1.1 | Tomato | extracellular | 6.95 | 21.26 |
| Solyc09g017980.1.1 | Tomato | extracellular | 5.66 | 21.26 |
| Solyc10g047480.1.1 | Tomato | nucleus | 13.13 | 21.25 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 5.79 | 20.83 |
| Solyc08g068810.2.1 | Tomato | cytosol | 14.54 | 20.58 |
| Solyc08g005080.1.1 | Tomato | cytosol | 12.74 | 20.41 |
| Solyc04g076210.2.1 | Tomato | nucleus | 28.83 | 20.38 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 6.05 | 20.09 |
| Solyc01g068240.2.1 | Tomato | cytosol | 13.64 | 19.89 |
| Solyc08g021830.1.1 | Tomato | cytosol | 8.88 | 19.71 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 17.12 | 19.39 |
| Solyc09g017990.1.1 | Tomato | plastid | 11.84 | 19.29 |
| Solyc11g065210.1.1 | Tomato | cytosol | 12.74 | 18.54 |
| Solyc09g015610.1.1 | Tomato | cytosol | 2.96 | 18.25 |
| Solyc02g005600.1.1 | Tomato | vacuole | 11.07 | 17.62 |
| Solyc07g005530.2.1 | Tomato | nucleus | 20.21 | 17.01 |
| Solyc08g076910.2.1 | Tomato | nucleus | 14.67 | 15.97 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | InterPro:IPR002893 | InterPro:IPR028889 | UniProt:K4CMC5 |
| PFAM:PF00443 | PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 |
| PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc08g069050.2 |
| EnsemblPlants:Solyc08g069050.2.1 | TMHMM:TMhelix | UniParc:UPI000276ACC7 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:58127853..58136943
Molecular Weight (calculated)
86294.9 Da
IEP (calculated)
5.788
GRAVY (calculated)
-0.359
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVAVDLNSY LQFVLTAIAV IVTLVYLVKS TASKYFVVDD DSNFESSASP TAGFVDRRMD PATPEGCAVC SNVTKKQCSR CKMVKYCSEA CQRSHWNSGH
101: KFKCKDLQLS GKGSSLHGRK SSAVSLSHAS GTSKVLDHSK KVLFPYEEFL ELFNWDSPGF PPCGLLNCGN SCFANVVLQC LTYTKPLVAY LLEKGHLREC
201: RRNGWCFLCE FQHHVERASR SQQPFSPINI LSRLPNIGGN LGYGKQEDAH EFMRFAIDMM QSVCLDEFGG EKAVPPNTQE TTLIQHIFGG HLQSQVICTE
301: CSNVSNQIEN MMDLTVEIHG DAESLEECLD QFTAREWLDG DNLYKCDGCN DYVKAWKRLM VRRAPNILTI ALKRFQSGRF GKLNKRVTFP ETLDLHPYMS
401: ETGDGNDIYK LYAVIVHVDM LNASFFGHYI CYIKDFRGSW HRIDDCKVVK VDLDEVLSQG AYMLLYSRIY PRRTSLFPLG PLQKEDQDTI KVENKPGSTD
501: QHVECLSETG SPATVVDSFS PPTLNGSESK IIGAKEELFS LTNPEDRMEV DFVASSYVQQ ELQDVKPYIR AVGTSFPRVV SSSSFGVSSL AEADIQECET
601: ISPVSDSKDG TEPCQRTTND CLLNSSFKED SVATYGEILD ASSSASKFGD ISDNEKLKNS SEMPNIANQK EKNSSHGIRN VVLKSDGGSI SGAKSKPLFS
701: PGFLGKRPLN LCAKKDVSWQ VCNSTLNGLT NSCTMPELSH EIHIDKDDQD ANVEIKNSES NVSIEQAAVS LNETNHL
101: KFKCKDLQLS GKGSSLHGRK SSAVSLSHAS GTSKVLDHSK KVLFPYEEFL ELFNWDSPGF PPCGLLNCGN SCFANVVLQC LTYTKPLVAY LLEKGHLREC
201: RRNGWCFLCE FQHHVERASR SQQPFSPINI LSRLPNIGGN LGYGKQEDAH EFMRFAIDMM QSVCLDEFGG EKAVPPNTQE TTLIQHIFGG HLQSQVICTE
301: CSNVSNQIEN MMDLTVEIHG DAESLEECLD QFTAREWLDG DNLYKCDGCN DYVKAWKRLM VRRAPNILTI ALKRFQSGRF GKLNKRVTFP ETLDLHPYMS
401: ETGDGNDIYK LYAVIVHVDM LNASFFGHYI CYIKDFRGSW HRIDDCKVVK VDLDEVLSQG AYMLLYSRIY PRRTSLFPLG PLQKEDQDTI KVENKPGSTD
501: QHVECLSETG SPATVVDSFS PPTLNGSESK IIGAKEELFS LTNPEDRMEV DFVASSYVQQ ELQDVKPYIR AVGTSFPRVV SSSSFGVSSL AEADIQECET
601: ISPVSDSKDG TEPCQRTTND CLLNSSFKED SVATYGEILD ASSSASKFGD ISDNEKLKNS SEMPNIANQK EKNSSHGIRN VVLKSDGGSI SGAKSKPLFS
701: PGFLGKRPLN LCAKKDVSWQ VCNSTLNGLT NSCTMPELSH EIHIDKDDQD ANVEIKNSES NVSIEQAAVS LNETNHL
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.