Factsheet for Solyc07g061780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0140g00200.t01	Wine grape	plasma membrane	56.11	54.36
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	53.11	51.87
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	52.48	51.21
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	46.07	50.8
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	46.07	50.74
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	45.96	50.63
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.27	50.11
CDX96790	Canola	nucleus	42.75	49.46
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	47.41	49.35
CDX83925	Canola	nucleus	43.17	49.23
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	41.2	47.49
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	42.44	44.28
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	44.1	43.69
TraesCS6D01G179700.1	Wheat	plasma membrane	44.1	43.6
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	43.27	43.27
TraesCS6B01G231700.4	Wheat	plasma membrane	44.0	43.19
GSMUA_Achr2P20080_001	Banana	plasma membrane	42.03	43.15
TraesCS6A01G192600.1	Wheat	plasma membrane	43.69	43.06
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.96	42.78
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	43.06	41.35
Solyc12g096430.1.1	Tomato	nucleus, plastid	20.6	31.99
Solyc08g069050.2.1	Tomato	extracellular	23.19	28.83
Solyc04g056290.2.1	Tomato	nucleus	10.77	28.18
Solyc01g105240.2.1	Tomato	nucleus	10.66	28.14
Solyc08g048410.1.1	Tomato	cytosol	4.24	24.55
Solyc04g076210.2.1	Tomato	nucleus	27.85	24.48
Solyc10g047480.1.1	Tomato	nucleus	12.11	24.38
Solyc09g015600.1.1	Tomato	extracellular	7.56	23.4
Solyc08g048310.1.1	Tomato	extracellular, vacuole	4.97	22.22
Solyc09g017980.1.1	Tomato	extracellular	4.76	22.22
Solyc09g015580.1.1	Tomato	vacuole	7.14	22.19
Solyc07g007640.1.1	Tomato	cytosol	5.38	21.94
Solyc08g005080.1.1	Tomato	cytosol	10.56	21.03
Solyc08g068810.2.1	Tomato	cytosol	11.9	20.95
Solyc08g021830.1.1	Tomato	cytosol	7.45	20.57
Solyc01g068240.2.1	Tomato	cytosol	11.28	20.45
Solyc11g065210.1.1	Tomato	cytosol	11.28	20.41
Solyc09g017990.1.1	Tomato	plastid	10.04	20.34
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	14.29	20.12
Solyc08g023360.1.1	Tomato	extracellular	5.28	20.08
Solyc09g015610.1.1	Tomato	cytosol	2.59	19.84
Solyc08g021790.1.1	Tomato	extracellular, vacuole	4.76	19.66
Solyc02g005600.1.1	Tomato	vacuole	9.73	19.26
Solyc08g076910.2.1	Tomato	nucleus	12.63	17.09
Solyc07g005530.2.1	Tomato	nucleus	13.04	13.65

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	MEROPS:C19.096	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0004843	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008283	GO:GO:0009056	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010154	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	GO:GO:0048364	GO:GO:0048366	GO:GO:0048367	InterPro:IPR002893
InterPro:IPR028889	UniProt:K4CGL1	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235
PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001
EnsemblPlantsGene:Solyc07g061780.2	EnsemblPlants:Solyc07g061780.2.1	TMHMM:TMhelix	UniParc:UPI000276B276	InterPro:USP_CS	InterPro:USP_dom
InterPro:Znf_MYND	SEG:seg	:	:	:	:

Description

Ubiquitin carboxyl-terminal hydrolase 15 [Source:Projected from Arabidopsis thaliana (AT1G17110) UniProtKB/Swiss-Prot;Acc:Q9FPS9]

Coordinates

chr7:+:64733275..64740515

Molecular Weight (calculated)

107566.0 Da

IEP (calculated)

8.035

GRAVY (calculated)

-0.493

Length

966 amino acids

Sequence
(BLAST)

001: MLEPRETDIP TLFLVLVVLP LVSYILLGKW NEAAKKKERV GLLAQRAAEE AHKTQTMSAV SITPIPLVPL PSSATHQCAR CHSPATTRCS QCKSVRYCSG
101: KCQILHWRQV HKLECLQLGN NCNSSSSKPA LTDELPGRMS FDSYVEAQYS DNNLNQLWLG KTSPDGVTET PIVTPVAPIT VSVATNTSGS PKVGRRSVDK
201: RVHKGNRDIL RRGDGTMSES SERASQSRSR DGDSMLSEHD SIADGFISEH TDLMNTMGER HMLQKQKEHI SRNHRHVSSS SNLEGHETNA CKNQKELIDE
301: KSLTREGVVT GTPAIPLNCS SGKTSTRRSS RAKSASPSPG TKSHRTPKTS REEMCSGLEG KGLNIDESKN ARRKDAVPPQ AGSGVANLGI MRMFGLAKSS
401: KVVGHQSLES RADKQKKLKM LFPYEEFVKL FEYEDFTLLP RGLINCGNSC YANAVLQCLM CTKPLTIYLL HRSHSRTYCR KDWCLVCELE QHAMMLRESG
501: GPLSPNKILL HMRSINGQIG NGSQEDAHEF LRFIVASMQS ISLEALGGEN AVDPRLQQTT FIQHTFGGRL RSKVKCLRCH HESACYENIM DLSLEIFGWV
601: ESLEDALTQF TSPEDLDGEN MYRCGRCACY VRAQKQLSIQ EAPNILTIVL KRFQEGSYGK INKCITFPDM LDMIPFMTGT DDIPPLYMLY AVVVHLDTLN
701: ASFSGHYISY VKDLHLRGNW FRIDDTEVHP VSMSQVMSEG AYILFYKRSS PRPARKISRR QVPGIVKHCP PKSTKTSRPE QTKAEHLYVG VDPYMNHRPE
801: MNSDIIDCTS GGLVKNANRN RPPVVGTYTE SMTAEFSDAT SSDWSLFTSS DEASFTTEST RYSFSTVDYG DANAADPFSS IINSLCGSDY SSNRTVACSM
901: FSSSKPHTRF FSESKGSVLD STAGTSIPRQ VTVPYSEGFH SDSSNHVHVE YGSEPRYEQT YYPYNV

Best Arabidopsis Sequence Match ( AT1G17110.3 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.