Factsheet for Bra016618.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96790	Canola	nucleus	90.7	96.89
CDX83925	Canola	nucleus	89.57	94.33
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	85.31	86.77
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	85.87	82.54
VIT_19s0140g00200.t01	Wine grape	plasma membrane	53.25	47.64
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	52.13	47.02
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	52.13	46.97
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	50.11	46.27
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	43.27	46.06
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	42.83	41.25
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	44.17	40.79
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	43.83	40.31
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	43.95	40.21
GSMUA_Achr2P20080_001	Banana	plasma membrane	42.38	40.17
TraesCS6D01G179700.1	Wheat	plasma membrane	43.83	40.02
TraesCS6A01G192600.1	Wheat	plasma membrane	43.72	39.8
TraesCS6B01G231700.4	Wheat	plasma membrane	43.72	39.63
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	44.28	39.26
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	26.01	36.77
Bra011290.1-P	Field mustard	vacuole	24.78	36.11
Bra007837.1-P	Field mustard	nucleus	20.63	36.08
Bra024386.1-P	Field mustard	golgi	25.9	30.12
Bra038533.1-P	Field mustard	nucleus	10.87	27.32
Bra010647.1-P	Field mustard	nucleus	11.1	26.61
Bra019219.1-P	Field mustard	golgi	28.7	25.3
Bra013814.1-P	Field mustard	golgi	27.58	24.12
Bra024037.1-P	Field mustard	cytosol	10.76	24.0
Bra011823.1-P	Field mustard	nucleus	10.99	22.22
Bra028566.1-P	Field mustard	cytosol	11.88	21.03
Bra027341.1-P	Field mustard	mitochondrion	14.69	19.07
Bra021031.1-P	Field mustard	nucleus	13.12	18.22
Bra010268.1-P	Field mustard	cytosol	11.32	17.75
Bra006790.1-P	Field mustard	nucleus, plastid	16.14	17.33
Bra022060.1-P	Field mustard	nucleus	12.78	17.14
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	11.1	16.78
Bra025000.1-P	Field mustard	endoplasmic reticulum	13.12	16.05
Bra020400.1-P	Field mustard	nucleus	14.46	15.49
Bra002683.1-P	Field mustard	nucleus	15.7	14.26

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra016618	EnsemblPlants:Bra016618.1	EnsemblPlants:Bra016618.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	UniProt:M4DJE0	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235
PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001
TMHMM:TMhelix	UniParc:UPI00025456CC	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg

Description

AT1G17110 (E=0.0) UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEASE 15); ubiquitin-specific protease

Coordinates

chrA08:+:19306656..19310484

Molecular Weight (calculated)

100060.0 Da

IEP (calculated)

7.991

GRAVY (calculated)

-0.542

Length

892 amino acids

Sequence
(BLAST)

001: MLEPRGADIP LLFLVLVVFP VVAYILLGKW SDISKKRGRA NLLAQMAAEE AFRAETEVNV NRGVRFEAAA TENRGLRTKT KAAVSAASGA VRDDFVSGVS
101: GTVAEQRYES VAATCGVPVS NEFHVCARCF SPAKTRCSRC KSVRYCSGQC QIIHWRLAHK DECIPVEACS SSSERASFEN ESVLHDQDMD ATMYSNGTKQ
201: KAKGKTSKIS VEFESLGIST PQANTQGRKS VGKPNSSKSN RESFSGEAAC AGGDNKKGHT KHKLRSNSAA VETNSRRHSV DNSSMQMNGQ AFVSGMQETC
301: ESNLGARSSF GCPNAQYPSN GTRTATLRKS GEQPCTETSK KGLVPAVSKT VRSKDTCIAE ESNGISSTMG LMKMMGLRNS TKHGDRHQNL RMLFPYEEFV
401: KFFQCEVFYL SPRGLVNCGN SCYANAVLQS LTCTKPLVAY LLQRSHSRSC SGKDWCLMCE LEQHVMMLRE SGGPLSASRI LSQMRSINCQ IGDGSQEDAH
501: EFLRLLVASM QSICLERLGG ETKVDTRLQE TTLVQHMFGG RLRSKVKCLR CGHESERYEN IMDLTLEIYG WVESLQDALT QFTRPEDLDG ENMYRCSRCA
601: GYVKARKELS IHEAPNILTI VLKRFQEGRY GKINKCISFP EMLDMIPFMT RTGDVPPLYM LYAVIVHLDT LNASFSGHYI SYVKDLRGNW FRIDDSEIHQ
701: VPMTQVMSEG AYMLFYMRSY PRPLRGEHNG KAQVRHSQSQ PRDEMKEQRK PVNRFKPRAD HHKNFESSSE WSLFTSSDEA SFTSESTRDS FSTVDYTDGC
801: NVLDSSSPFS IFNNLRHNVE PSPHNTVACR MFSGTKSETR YFVEEETNHN NTVVMDSAPT SHDYYQQSMY VNYETNPGFN CQDQTYSYEQ NW

Best Arabidopsis Sequence Match ( AT1G17110.3 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.