Factsheet for Bra022060.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37145	Canola	cytosol	98.2	98.05
CDX87681	Canola	nucleus	84.96	89.68
Bra025000.1-P	Field mustard	endoplasmic reticulum	68.57	62.55
AT5G46740.1	Thale cress	nucleus, plastid	63.91	58.06
Bra021031.1-P	Field mustard	nucleus	41.05	42.52
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	21.5	40.62
Solyc09g015580.1.1	Tomato	vacuole	17.89	38.26
Solyc09g015600.1.1	Tomato	extracellular	17.74	37.82
PGSC0003DMT400093121	Potato	cytosol	16.24	37.37
Solyc09g017980.1.1	Tomato	extracellular	11.13	35.75
VIT_02s0012g01340.t01	Wine grape	nucleus	28.12	35.62
Solyc08g048410.1.1	Tomato	cytosol	8.27	32.93
Solyc08g005080.1.1	Tomato	cytosol	23.61	32.37
Solyc08g048310.1.1	Tomato	extracellular, vacuole	10.38	31.94
Solyc08g021830.1.1	Tomato	cytosol	16.69	31.71
Solyc08g021790.1.1	Tomato	extracellular, vacuole	10.98	31.2
Solyc09g017990.1.1	Tomato	plastid	22.26	31.03
Solyc10g047480.1.1	Tomato	nucleus	21.95	30.42
Solyc08g076910.2.1	Tomato	nucleus	32.33	30.11
Solyc08g023360.1.1	Tomato	extracellular	11.43	29.92
PGSC0003DMT400045160	Potato	nucleus	31.73	29.63
Solyc09g015610.1.1	Tomato	cytosol	5.56	29.37
PGSC0003DMT400046008	Potato	cytosol	23.31	29.19
KRH74417	Soybean	nucleus	31.73	29.18
KRH39541	Soybean	nucleus	32.03	28.82
Solyc02g005600.1.1	Tomato	vacuole	20.9	28.48
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	24.96	28.33
PGSC0003DMT400093591	Potato	cytosol	10.68	28.29
PGSC0003DMT400089939	Potato	cytosol	15.79	28.07
Zm00001d051513_P001	Maize	nucleus	24.66	27.75
Bra038533.1-P	Field mustard	nucleus	14.59	27.32
Bra010647.1-P	Field mustard	nucleus	14.59	26.08
TraesCS6A01G264800.1	Wheat	nucleus	26.47	23.98
HORVU6Hr1G067180.4	Barley	nucleus	26.62	23.95
TraesCS6D01G250100.1	Wheat	nucleus	26.47	23.82
TraesCS6B01G291800.1	Wheat	nucleus	26.32	23.68
Zm00001d017686_P002	Maize	mitochondrion, nucleus	25.41	22.84
OQU85579	Sorghum	nucleus	25.41	22.68
Bra024037.1-P	Field mustard	cytosol	13.53	22.5
PGSC0003DMT400088084	Potato	cytosol	11.28	22.32
Bra011823.1-P	Field mustard	nucleus	14.74	22.22
Bra011290.1-P	Field mustard	vacuole	18.5	20.1
Bra028566.1-P	Field mustard	cytosol	14.14	18.65
Bra007837.1-P	Field mustard	nucleus	13.83	18.04
Bra006790.1-P	Field mustard	nucleus, plastid	22.41	17.93
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	16.39	17.27
Bra027341.1-P	Field mustard	mitochondrion	17.44	16.89
Bra020400.1-P	Field mustard	nucleus	21.05	16.81
Bra010268.1-P	Field mustard	cytosol	14.14	16.52
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	13.83	15.59
Bra002683.1-P	Field mustard	nucleus	22.56	15.27
Bra024386.1-P	Field mustard	golgi	16.24	14.08
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	17.14	12.78
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	16.84	12.77
Bra019219.1-P	Field mustard	golgi	19.1	12.55
Bra013814.1-P	Field mustard	golgi	18.5	12.06

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	EnsemblPlantsGene:Bra022060	EnsemblPlants:Bra022060.1	EnsemblPlants:Bra022060.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889
UniProt:M4DZW3	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44033
PANTHER:PTHR44033:SF1	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI0002545F49	InterPro:USP_CS
InterPro:USP_dom	SEG:seg	:	:	:	:

Description

AT5G46740 (E=5e-181) UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin thiolesterase/ ubiquitin-specific protease

Coordinates

chrA02:-:18964810..18967545

Molecular Weight (calculated)

74769.4 Da

IEP (calculated)

5.540

GRAVY (calculated)

-0.589

Length

665 amino acids

Sequence
(BLAST)

001: MASSDPPPSP KIENPVKTLD DESSPTAPIR ALVTHSLALS SPIRQIQNPV ESSSSPSNNE CRDSQITPAG SYMPSFEYLS DDDDDHKIEP AEPFSWSYLK
101: NEPTGVGAGL YNSGNTCFIA SVLQCFTHTV PLLDALRYYK YQDTCNCGNE SFCVLKSLRD HIELALRSSG YDLQIHRFRD NLNYFSSDFQ INNQEDAHEF
201: LQSFLDKLER CSLDLTSRNT PGTVVSSQGV NIVDNVFGGR LVSKLHCCNC NSISEIFEPS VGWSLEIDDV EDLSSALESF TCVEKLEDQL TCDECKEKVS
301: KEKQLKFDKL PLVATFHLKR FKNDGVYMEK IFKDVRFPLE LDMLPYMSSN ENPEVSTKYY LYAMVEHQGS GVHYGHYSSY VRSAPGTWHH FDDAKVRRIS
401: EECVLSKNAY MLFYAREGTS WFSSAFEELK TLYEATPISF SPTSVLETTC REECNANKAC NGSVGVSVPG GDYRCDEPQD EVFYSAEPIS YDVSFAFDSP
501: PKADESGKPF AETFHQKEAT MYPACNRATT VDASVPEIKI QEKDPSPKRK AAERATIGED AYLPKPKIQK PNSFAKRQGP FQIQREHLQN KKEETHETKP
601: IRSTVAAASV ADLKEKEHAI QYLRNMPSSR SRMLAAAIGV EVKKKNISNI RRSNLHRNLS GRPSN

Best Arabidopsis Sequence Match ( AT5G46740.1 )
(BLAST)

001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL

Arabidopsis Description

UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.