Factsheet for Bra026003.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	97.72	97.72
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	93.73	93.84
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	86.77	85.31
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	84.83	80.17
VIT_19s0140g00200.t01	Wine grape	plasma membrane	53.71	47.24
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	53.14	47.12
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	52.68	46.67
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	50.63	45.96
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	43.79	45.82
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	44.01	41.68
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	44.93	40.79
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	44.7	40.41
GSMUA_Achr2P20080_001	Banana	plasma membrane	43.1	40.17
TraesCS6D01G179700.1	Wheat	plasma membrane	44.7	40.12
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	44.58	40.1
TraesCS6A01G192600.1	Wheat	plasma membrane	44.47	39.8
TraesCS6B01G231700.4	Wheat	plasma membrane	44.58	39.74
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	45.04	39.26
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	26.34	36.61
Bra011290.1-P	Field mustard	vacuole	25.31	36.27
Bra007837.1-P	Field mustard	nucleus	20.98	36.08
Bra024386.1-P	Field mustard	golgi	26.45	30.25
Bra038533.1-P	Field mustard	nucleus	11.17	27.61
Bra010647.1-P	Field mustard	nucleus	11.29	26.61
Bra019219.1-P	Field mustard	golgi	29.19	25.3
Bra013814.1-P	Field mustard	golgi	27.94	24.02
Bra024037.1-P	Field mustard	cytosol	10.72	23.5
Bra011823.1-P	Field mustard	nucleus	11.29	22.45
Bra028566.1-P	Field mustard	cytosol	11.97	20.83
Bra027341.1-P	Field mustard	mitochondrion	15.28	19.51
Bra010268.1-P	Field mustard	cytosol	11.63	17.93
Bra021031.1-P	Field mustard	nucleus	13.0	17.76
Bra022060.1-P	Field mustard	nucleus	12.77	16.84
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	11.17	16.61
Bra006790.1-P	Field mustard	nucleus, plastid	15.62	16.49
Bra025000.1-P	Field mustard	endoplasmic reticulum	13.0	15.64
Bra020400.1-P	Field mustard	nucleus	14.25	15.01
Bra002683.1-P	Field mustard	nucleus	15.39	13.75

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra026003	EnsemblPlants:Bra026003.1	EnsemblPlants:Bra026003.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	UniProt:M4EB44	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235
PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001
TMHMM:TMhelix	UniParc:UPI000253F28A	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg

Description

AT1G17110 (E=0.0) UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEASE 15); ubiquitin-specific protease

Coordinates

chrA06:-:6568958..6572649

Molecular Weight (calculated)

98598.6 Da

IEP (calculated)

8.070

GRAVY (calculated)

-0.573

Length

877 amino acids

Sequence
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SETSEKRGKA NLLAQMAAEE AFRAETDVRG VRFETMATEN RALRTKTRNA PAASGSLRAD FDAEQRPDSV
101: AVATCGVPVN TEGHVCARCL NPAKTRCSRC KSIRYCSGKC QIIHWRLAHK DECIPAETCS SSSERVSFEN DSVLHDNGMD SSTMYSNSIK QTAKGKTSKS
201: SVEFASEGIS QIDIRPRINT QGRKSVGKPN PSKSSRESFS GEAAACAGGD NNKGHTRHKS RSNIGAVETN SRRHSVDNSC MQMNGQTFES GMQESYKHNL
301: GASSSYACPN GIRAATLPKS ACTEKSKKGK VAAVSKTLRS KDTGVAEENN GNSSSMGSNL MKMMGLRNSS KHDDRHKNLK MLFPYEEFVK FFQCEVFYLS
401: PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRAS GGPLSASRIL SQMRSINCQI GDGSQEDAHE FLRLLVASMQ
501: SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI
601: HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL NASFSGHYIS YVKDLRGNWF RIDDSEIHQV PMTQVMSEGA
701: YMLFYMRSYP RPQRGEHSSK SQVRHPQPRN EMKEQRKPVN RFKPRADYNK NLVESSSSEW SLFTSSDEAA SFTTESTRDS FSTVDYTDGC HVLDSSSPFS
801: IFNNLHHNVE PSPHNTVACR MFSGTKPETR YFVEEEANHN NSVVMDDISS HGYYQQSMYV DYETNCQEQT YSYEQNW

Best Arabidopsis Sequence Match ( AT1G17110.3 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.