Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045160 | Potato | nucleus | 93.7 | 93.96 |
| Solyc08g048410.1.1 | Tomato | cytosol | 11.62 | 49.7 |
| Solyc09g015580.1.1 | Tomato | vacuole | 21.57 | 49.52 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 36.27 | 49.33 |
| Solyc09g015600.1.1 | Tomato | extracellular | 21.29 | 48.72 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 15.27 | 46.58 |
| Solyc10g047480.1.1 | Tomato | nucleus | 30.95 | 46.04 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 21.99 | 44.6 |
| Solyc08g005080.1.1 | Tomato | cytosol | 30.25 | 44.54 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 13.31 | 43.98 |
| Solyc09g017980.1.1 | Tomato | extracellular | 12.75 | 43.96 |
| Solyc08g023360.1.1 | Tomato | extracellular | 15.55 | 43.7 |
| Solyc09g015610.1.1 | Tomato | cytosol | 7.7 | 43.65 |
| Solyc08g021830.1.1 | Tomato | cytosol | 21.29 | 43.43 |
| Solyc09g017990.1.1 | Tomato | plastid | 28.15 | 42.14 |
| Solyc02g005600.1.1 | Tomato | vacuole | 27.45 | 40.16 |
| KRH39541 | Soybean | nucleus | 37.25 | 35.99 |
| KRH74417 | Soybean | nucleus | 35.15 | 34.72 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 27.59 | 33.62 |
| CDX87681 | Canola | nucleus | 29.41 | 33.33 |
| Zm00001d051513_P001 | Maize | nucleus | 27.59 | 33.33 |
| CDY37145 | Canola | cytosol | 30.39 | 32.58 |
| Bra022060.1-P | Field mustard | nucleus | 30.11 | 32.33 |
| CDX76553 | Canola | cytosol | 28.57 | 31.78 |
| Bra021031.1-P | Field mustard | nucleus | 28.57 | 31.78 |
| AT4G17895.1 | Thale cress | nucleus | 29.41 | 30.22 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 30.25 | 29.63 |
| CDY58499 | Canola | endoplasmic reticulum | 29.69 | 29.4 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 29.55 | 28.83 |
| CDX77686 | Canola | endoplasmic reticulum | 29.13 | 27.55 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 28.29 | 27.33 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 27.87 | 27.11 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 27.87 | 26.93 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 27.87 | 26.93 |
| OQU85579 | Sorghum | nucleus | 28.01 | 26.85 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 27.59 | 26.62 |
| Solyc07g007640.1.1 | Tomato | cytosol | 8.68 | 26.16 |
| Solyc04g056290.2.1 | Tomato | nucleus | 13.45 | 26.02 |
| Solyc01g105240.2.1 | Tomato | nucleus | 13.31 | 25.96 |
| Solyc08g068810.2.1 | Tomato | cytosol | 14.71 | 19.13 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 18.21 | 18.95 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 15.41 | 17.68 |
| Solyc01g068240.2.1 | Tomato | cytosol | 12.32 | 16.51 |
| Solyc07g005530.2.1 | Tomato | nucleus | 21.15 | 16.36 |
| Solyc11g065210.1.1 | Tomato | cytosol | 12.18 | 16.29 |
| Solyc08g069050.2.1 | Tomato | extracellular | 15.97 | 14.67 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 17.09 | 12.63 |
| Solyc04g076210.2.1 | Tomato | nucleus | 17.37 | 11.28 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:K4CN51 | PFAM:PF00443 | ScanProsite:PS00972 |
| ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc08g076910.2 | EnsemblPlants:Solyc08g076910.2.1 | UniParc:UPI000276C0B8 | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:60832077..60836392
Molecular Weight (calculated)
79704.4 Da
IEP (calculated)
4.886
GRAVY (calculated)
-0.542
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALCSETLE TGSKPVDFAN SDETLDMSSP ISADQNLPNT ENSAGFNESE ELCMEEEELD ASPVRTYSAP YYCSRWGQPW GKVTDSKPLD SQLTDAEPKD
101: EPSPFDWTDG SSENTVETKK LVTVESQWNS YRDEEPKFIQ GAGLANLGNT CFLNAVLQSF MHTVPLIQGL KSIDHATPCN GYLNGFCVIC ALRKLIDASL
201: FSEAGVVSPW KFVNNLNYFS STFHRFQQED AHEFLQCFLD KLERCYDDSK SKDCQTLETD NIVKQAFGGR LVSKLRCCNC GHCSDTYETL IDLSLEIEDV
301: DSVDTALESF TKVEKIEDSE TKFTCEKCKE QVSIEKQLVL DKAPTVAALH LKRFKTDGSL VEKIDKYVSF PLELDLHAYA DNSQTDNVEM KYDLYAVIVH
401: IGFSYCSGHY YSFIRSAPNE WYKFDDSKVV RVREDYVLSQ EAYVLFYAKR GTAWFSDFIE GQKPFIDPSI LSTSPKSVLE NTDAVCVPSP LLPNAQAFGV
501: KESNGAANES SPSSLNKVHD SDGKENVQMM STPTPPLGAS NILVSKSREV GKVSSPSVLK DLSKPVSSVS VLKENSSTLT PGSTSRTLYI TPDTPPRSPS
601: PEIYREDPPD NDYHIPRGHL RMVGQVSCKK QLQKDDVEQD MERKQACFLI KKNMPGSRGQ QLLAAMQGLR SEGSAKKRRR RMEVSPTRDD SNSTSRRRSS
701: IGSTMRPVMA GSMR
101: EPSPFDWTDG SSENTVETKK LVTVESQWNS YRDEEPKFIQ GAGLANLGNT CFLNAVLQSF MHTVPLIQGL KSIDHATPCN GYLNGFCVIC ALRKLIDASL
201: FSEAGVVSPW KFVNNLNYFS STFHRFQQED AHEFLQCFLD KLERCYDDSK SKDCQTLETD NIVKQAFGGR LVSKLRCCNC GHCSDTYETL IDLSLEIEDV
301: DSVDTALESF TKVEKIEDSE TKFTCEKCKE QVSIEKQLVL DKAPTVAALH LKRFKTDGSL VEKIDKYVSF PLELDLHAYA DNSQTDNVEM KYDLYAVIVH
401: IGFSYCSGHY YSFIRSAPNE WYKFDDSKVV RVREDYVLSQ EAYVLFYAKR GTAWFSDFIE GQKPFIDPSI LSTSPKSVLE NTDAVCVPSP LLPNAQAFGV
501: KESNGAANES SPSSLNKVHD SDGKENVQMM STPTPPLGAS NILVSKSREV GKVSSPSVLK DLSKPVSSVS VLKENSSTLT PGSTSRTLYI TPDTPPRSPS
601: PEIYREDPPD NDYHIPRGHL RMVGQVSCKK QLQKDDVEQD MERKQACFLI KKNMPGSRGQ QLLAAMQGLR SEGSAKKRRR RMEVSPTRDD SNSTSRRRSS
701: IGSTMRPVMA GSMR
001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
Arabidopsis Description
UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.