Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39541 | Soybean | nucleus | 86.45 | 84.57 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 32.23 | 44.38 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 20.61 | 42.33 |
| Solyc09g015600.1.1 | Tomato | extracellular | 17.84 | 41.35 |
| Solyc09g015580.1.1 | Tomato | vacuole | 17.7 | 41.16 |
| PGSC0003DMT400093121 | Potato | cytosol | 15.63 | 39.1 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 12.45 | 38.46 |
| Solyc08g048410.1.1 | Tomato | cytosol | 8.71 | 37.72 |
| Solyc08g005080.1.1 | Tomato | cytosol | 25.03 | 37.32 |
| Solyc08g023360.1.1 | Tomato | extracellular | 12.86 | 36.61 |
| Solyc08g021830.1.1 | Tomato | cytosol | 17.7 | 36.57 |
| Solyc10g047480.1.1 | Tomato | nucleus | 24.2 | 36.46 |
| PGSC0003DMT400046008 | Potato | cytosol | 26.42 | 35.97 |
| PGSC0003DMT400045160 | Potato | nucleus | 34.85 | 35.39 |
| Solyc08g076910.2.1 | Tomato | nucleus | 34.72 | 35.15 |
| Solyc09g017980.1.1 | Tomato | extracellular | 9.82 | 34.3 |
| Solyc09g017990.1.1 | Tomato | plastid | 22.55 | 34.17 |
| Solyc09g015610.1.1 | Tomato | cytosol | 5.95 | 34.13 |
| PGSC0003DMT400089939 | Potato | cytosol | 17.57 | 33.96 |
| PGSC0003DMT400093591 | Potato | cytosol | 11.76 | 33.86 |
| Zm00001d051513_P001 | Maize | nucleus | 27.66 | 33.84 |
| CDX87681 | Canola | nucleus | 28.77 | 33.02 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 9.82 | 32.87 |
| Solyc02g005600.1.1 | Tomato | vacuole | 21.85 | 32.38 |
| CDX76553 | Canola | cytosol | 28.22 | 31.78 |
| Bra021031.1-P | Field mustard | nucleus | 28.22 | 31.78 |
| Bra022060.1-P | Field mustard | nucleus | 29.18 | 31.73 |
| CDY37145 | Canola | cytosol | 29.18 | 31.68 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 25.59 | 31.57 |
| AT4G17895.1 | Thale cress | nucleus | 29.18 | 30.36 |
| KRH72298 | Soybean | cytosol, plastid | 21.02 | 29.92 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 29.88 | 29.51 |
| CDY58499 | Canola | endoplasmic reticulum | 28.49 | 28.57 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 28.63 | 28.4 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 27.8 | 27.38 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 27.94 | 27.33 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 27.8 | 27.2 |
| CDX77686 | Canola | endoplasmic reticulum | 28.35 | 27.15 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 27.66 | 27.06 |
| OQU85579 | Sorghum | nucleus | 27.39 | 26.58 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 26.69 | 26.08 |
| PGSC0003DMT400088084 | Potato | cytosol | 12.03 | 25.89 |
| KRG97572 | Soybean | nucleus | 13.14 | 25.75 |
| KRH59329 | Soybean | nucleus | 13.0 | 25.47 |
| KRH43175 | Soybean | nucleus | 13.0 | 25.47 |
| KRH31299 | Soybean | nucleus | 12.86 | 25.2 |
| KRH43852 | Soybean | nucleus | 17.29 | 19.5 |
| KRH13611 | Soybean | nucleus | 17.01 | 18.86 |
| KRH05289 | Soybean | nucleus | 13.97 | 18.2 |
| KRH03060 | Soybean | nucleus | 22.68 | 18.16 |
| KRH05330 | Soybean | golgi, plasma membrane | 17.7 | 17.37 |
| KRH15753 | Soybean | nucleus | 13.28 | 17.33 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 17.43 | 17.28 |
| KRH61621 | Soybean | golgi | 16.87 | 16.44 |
| KRH52289 | Soybean | golgi | 16.6 | 16.35 |
| KRH39864 | Soybean | cytosol | 11.89 | 16.17 |
| KRH23933 | Soybean | cytosol | 11.89 | 15.9 |
| KRH03615 | Soybean | cytosol | 13.0 | 15.88 |
| KRH20191 | Soybean | plastid | 13.0 | 15.82 |
| KRH69660 | Soybean | golgi | 17.15 | 13.22 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 16.87 | 13.16 |
| KRH13569 | Soybean | endoplasmic reticulum, plasma membrane | 17.84 | 13.04 |
| KRH21804 | Soybean | endoplasmic reticulum, plasma membrane | 17.84 | 13.03 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 14.66 | 11.94 |
| KRH72452 | Soybean | golgi, plasma membrane | 16.6 | 11.58 |
| KRH16837 | Soybean | golgi | 16.6 | 11.48 |
| KRH62182 | Soybean | golgi, vacuole | 17.15 | 10.9 |
Protein Annotations
| EntrezGene:100806936 | Gene3D:3.90.70.10 | MapMan:35.1 | EMBL:ACUP02000024 | EnsemblPlantsGene:GLYMA_01G018300 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | UniProt:I1J4V4 |
| InterPro:IPR028889 | EnsemblPlants:KRH74417 | ProteinID:KRH74417 | ProteinID:KRH74417.1 | PFAM:PF00443 | ScanProsite:PS00972 |
| ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | UniParc:UPI0002948FD5 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:1750027..1754223
Molecular Weight (calculated)
79994.8 Da
IEP (calculated)
4.728
GRAVY (calculated)
-0.408
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLSLSSPAM ASEEPMDAPP APNLLSETLS AAELVADLGG DYALFPPGGG STEFRQLDDD VSSSLWSSAL VSNSRVSAVA PESWIAPQGN WLLPENEGSD
101: NAESASEVVP SKMGAGLVNL GNTCFLNAIL QCFTHTVPLV QGLRSSTHPI PCSGHKDGFC VICALRIHVE RSLAASGGTF SPLEFVNNLK YFSSDFRRYQ
201: QEDAHEFMQC TLDKLERCFL GLKKSNLNFE DVNLVEKVFG GRLISKLQCS TCDHTSNTFE PLIDMSLEID NVDSLPSALE SFTKVENIDD NLQCDNCKEE
301: VSMEKQLMLD QTPSVAAFHL KRFKTDGILV EKIDKHIDFP LELDLQPYTI KVMEDPGAEN DVPLKYDLYA IVVHTGLSST SGHYFCFVRS APDTWHKLDD
401: SMVTEVSVET VLSQEAYILF YARQGTPWFL SIMEEKTQCL NPNIMSTSPK SVLDVGDNMS KSNPILLPNI ERSVAEESKE YSEPQFDYYC QEDHGFLEIN
501: DTEDVTHGSG QLLSGSNQEI FYSNTSKDVD AQKLFSSRGG HKVATHGCGQ LLSGLNQESV GLNSSKNVDA QQLFRNWTTL DDSAMFDIGN SYIENGSLDN
601: DNTFQEAVDF LEKAGFHSLT LPSLPPDDAP DKFHISCDNL KRENHRSCKR SSNKLTGDSE ERREAVKYLC KNRSRRGALL KFVTPNKVLD KKRKNMDSLQ
701: CKKSTKKPSH TSVTPPVAAG SSR
101: NAESASEVVP SKMGAGLVNL GNTCFLNAIL QCFTHTVPLV QGLRSSTHPI PCSGHKDGFC VICALRIHVE RSLAASGGTF SPLEFVNNLK YFSSDFRRYQ
201: QEDAHEFMQC TLDKLERCFL GLKKSNLNFE DVNLVEKVFG GRLISKLQCS TCDHTSNTFE PLIDMSLEID NVDSLPSALE SFTKVENIDD NLQCDNCKEE
301: VSMEKQLMLD QTPSVAAFHL KRFKTDGILV EKIDKHIDFP LELDLQPYTI KVMEDPGAEN DVPLKYDLYA IVVHTGLSST SGHYFCFVRS APDTWHKLDD
401: SMVTEVSVET VLSQEAYILF YARQGTPWFL SIMEEKTQCL NPNIMSTSPK SVLDVGDNMS KSNPILLPNI ERSVAEESKE YSEPQFDYYC QEDHGFLEIN
501: DTEDVTHGSG QLLSGSNQEI FYSNTSKDVD AQKLFSSRGG HKVATHGCGQ LLSGLNQESV GLNSSKNVDA QQLFRNWTTL DDSAMFDIGN SYIENGSLDN
601: DNTFQEAVDF LEKAGFHSLT LPSLPPDDAP DKFHISCDNL KRENHRSCKR SSNKLTGDSE ERREAVKYLC KNRSRRGALL KFVTPNKVLD KKRKNMDSLQ
701: CKKSTKKPSH TSVTPPVAAG SSR
001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
Arabidopsis Description
UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.