CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03060	Soybean	nucleus	94.88	53.38
GSMUA_Achr3P04660_001	Banana	nucleus	58.66	49.67
VIT_19s0014g00210.t01	Wine grape	nucleus	63.39	36.02
CDY11838	Canola	nucleus, plastid	53.74	33.33
CDX88651	Canola	nucleus, plastid	53.94	33.25
Solyc07g005530.2.1	Tomato	nucleus	60.24	33.15
Bra006790.1-P	Field mustard	nucleus, plastid	53.94	32.97
VIT_00s0174g00260.t01	Wine grape	nucleus	64.57	32.9
PGSC0003DMT400028924	Potato	nucleus	59.84	32.83
AT5G57990.1	Thale cress	nucleus	55.31	32.71
CDY32735	Canola	nucleus	51.18	32.46
CDY02782	Canola	nucleus	51.18	32.46
CDY57464	Canola	nucleus	52.95	31.72
Bra020400.1-P	Field mustard	nucleus	51.38	31.33
CDY55010	Canola	nucleus	52.17	31.18
GSMUA_Achr4P01920_001	Banana	nucleus	58.27	30.64
Os06t0184300-01	Rice	mitochondrion	53.15	29.22
TraesCS7A01G147900.1	Wheat	nucleus	50.79	28.01
HORVU7Hr1G030300.1	Barley	nucleus	51.18	27.96
TraesCS7D01G149800.1	Wheat	nucleus	51.18	27.75
EER89337	Sorghum	nucleus	50.0	27.7
TraesCS7B01G051400.2	Wheat	nucleus	51.18	27.69
Zm00001d045104_P005	Maize	nucleus	49.21	27.69
KRH59329	Soybean	nucleus	19.88	27.37
KRH43175	Soybean	nucleus	19.88	27.37
Bra002683.1-P	Field mustard	nucleus	52.76	27.29
KRG97572	Soybean	nucleus	19.49	26.83
KRH31299	Soybean	nucleus	19.29	26.56
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	42.52	25.44
TraesCS6D01G339500.1	Wheat	nucleus	48.82	24.01
TraesCS6A01G357500.1	Wheat	mitochondrion, nucleus	49.02	23.25
TraesCS6B01G389500.1	Wheat	nucleus	48.82	23.2
KRH13611	Soybean	nucleus	28.15	21.93
KRH43852	Soybean	nucleus	27.56	21.84
KRH74417	Soybean	nucleus	29.92	21.02
KRH39541	Soybean	nucleus	30.12	20.7
Os02t0795000-01	Rice	nucleus	47.44	20.34
KRH05289	Soybean	nucleus	22.05	20.18
KRH15753	Soybean	nucleus	21.46	19.68
KRH15706	Soybean	golgi, plasma membrane, vacuole	28.15	19.62
KRH05330	Soybean	golgi, plasma membrane	27.95	19.27
KRH03615	Soybean	cytosol	22.24	19.09
KRH20191	Soybean	plastid	22.24	19.02
KRH23933	Soybean	cytosol	19.49	18.3
KRH39864	Soybean	cytosol	19.09	18.23
KRH61621	Soybean	golgi	26.38	18.06
KRH52289	Soybean	golgi	25.98	17.98
KRH52893	Soybean	extracellular, golgi, vacuole	25.98	14.86
KRH69660	Soybean	golgi	27.36	14.82
KRH16837	Soybean	golgi	30.12	14.64
KRH72452	Soybean	golgi, plasma membrane	29.72	14.58
KRH74502	Soybean	golgi, plasma membrane, vacuole	26.57	14.56
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	28.35	14.56
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	28.35	14.55
KRH62182	Soybean	golgi, vacuole	29.72	13.27

Protein Annotations

MapMan:19.2.3.1.1.9	Gene3D:3.90.70.10	UniProt:A0A0R0KZL0	EMBL:ACUP02001199	EnsemblPlantsGene:GLYMA_02G203500	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889
EnsemblPlants:KRH72298	ProteinID:KRH72298	ProteinID:KRH72298.1	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR44033	PANTHER:PTHR44033:SF1	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
UniParc:UPI0006EE0BCD	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:38887835..38894718

Molecular Weight (calculated)

56808.7 Da

IEP (calculated)

8.876

GRAVY (calculated)

-0.450

Length

508 amino acids

Sequence
(BLAST)

001: MAETIVIQTE PPNPPDPSSS TTIATPLLSR NIVFLPVKKP FKGFSNDFHI ETLNPSSSEP RPSGSVAKKH DASEFSEYGL DPELSFGITF RRIGAGLRNL
101: GNTCFLNSVL QCLTYTEPLA AYLQSGKHKT SCHVAGFCAL CAIQNHVSRA LQSTGRILSP EDLVGNLRCI SRNFRNARQE DAHEYMVNLL ECMHKCCLPS
201: GIPSESPGAY EKSFVHKIFG GRLRSQVKCH QCSYCSNKFD PFLDLSLEIF KADSLQKALS NFTAAEWLDG GEKEYHCQRC KQKVRALKQL TIHKAPYVLT
301: IHLKRFHAHD PGQKIKKKIQ FGCALDLKPF VSGSYDGDVK YSLYGVLVHA GSSTHSGHYY CYVRTSNNMW YTLDDNRVSH VSEREVLNQQ AYMLFYVRDR
401: KNIVPRKPVD IAKKENMKTN VNGNRESSTS NHVLQEYPNG TIENKAEKDA LVLQKHNVIL AESLMQSKRH GSELSSKAQA QNDSPDGLSV AKSELGCLSS
501: LGSLWKRL

Best Arabidopsis Sequence Match ( AT5G57990.1 )
(BLAST)

001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI

Arabidopsis Description

UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.