Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G149800.1 | Wheat | nucleus | 96.2 | 94.56 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 94.9 | 93.08 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 92.18 | 91.29 |
| Os06t0184300-01 | Rice | mitochondrion | 66.45 | 66.23 |
| EER89337 | Sorghum | nucleus | 62.22 | 62.49 |
| Zm00001d045104_P005 | Maize | nucleus | 59.83 | 61.02 |
| KRH72298 | Soybean | cytosol, plastid | 28.01 | 50.79 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 31.16 | 47.83 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 47.45 | 40.8 |
| CDY02782 | Canola | nucleus | 34.64 | 39.83 |
| CDX88651 | Canola | nucleus, plastid | 35.18 | 39.32 |
| CDY11838 | Canola | nucleus, plastid | 34.74 | 39.07 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 35.18 | 38.99 |
| CDY57464 | Canola | nucleus | 35.83 | 38.92 |
| CDY32735 | Canola | nucleus | 33.44 | 38.45 |
| CDY55010 | Canola | nucleus | 34.64 | 37.53 |
| Bra020400.1-P | Field mustard | nucleus | 33.66 | 37.21 |
| AT5G57990.1 | Thale cress | nucleus | 34.64 | 37.14 |
| KRH03060 | Soybean | nucleus | 36.05 | 36.77 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 35.5 | 36.58 |
| Solyc07g005530.2.1 | Tomato | nucleus | 36.59 | 36.51 |
| PGSC0003DMT400028924 | Potato | nucleus | 36.7 | 36.5 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 38.22 | 36.44 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 37.89 | 35.01 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 31.6 | 34.28 |
| Bra002683.1-P | Field mustard | nucleus | 35.61 | 33.4 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 10.97 | 27.6 |
| TraesCS2A01G516100.1 | Wheat | mitochondrion | 10.53 | 26.22 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 10.42 | 25.95 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 19.0 | 23.84 |
| TraesCS1A01G329200.2 | Wheat | plastid | 16.07 | 22.8 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 9.99 | 22.55 |
| TraesCS1A01G192900.1 | Wheat | cytosol | 13.57 | 18.66 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 16.29 | 15.59 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 17.05 | 14.81 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 15.53 | 14.59 |
| TraesCS7A01G282200.4 | Wheat | plastid | 15.53 | 14.46 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 11.18 | 13.77 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| EnsemblPlantsGene:TraesCS7A01G147900 | EnsemblPlants:TraesCS7A01G147900.1 | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd02661 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:100759654..100766442
Molecular Weight (calculated)
99765.9 Da
IEP (calculated)
10.074
GRAVY (calculated)
-0.611
Length
921 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVSAAAAP VPEGVLHRRI EFHLARRPHA AAAVGGGGFQ METLNPDAAG GAATAAAGAA RGEAEARRPE KAEALGLDPE LTVARIYLGR IGAGLQNLGN
101: TCYLNSVLQC LTYTEPFAAY LQSGRHKSSC RTAGFCALCA LQNHVKTALR STGKIVTPSQ IVKNLRCISR SFRNSRQEDA HELMVNLLES MHKCCLPSGV
201: LSESASAYEK SLVHRIFGGR LRSQVKCTRC SHCSNTFDPF LDLSLDIGKA TTLVRALQNF TEDELLDGGQ KQYQCERCRQ KVVAKKRFTI DQAPNVLTVH
301: LKRFSPFRPR EKIDKKVDFQ PVLDLKPFMS DSKGADYKYS LYGVLVHAGW STQSGHYYCF VRTSSGMWHN LDDNQVRQVR EADVLKQKAY MLFYVRDRIG
401: NTLGRKDNST PNLPVNNMIP GKISSINGVM EAKSSGLTSP YANKKLQSTS NAHSSVSSMT LVDHCSTNAG KAETAAALQN SVLPAAQKAL GPQNDGATLS
501: TKSKQVASSS HKETSSSDQL ASSNQTMAKM SLQEPKTGGA LAKLGNNTSI ASSMVSGPAG LSETDKQTSC SQTCSKPSSN LVGTITGFTA QTFQTKDAVL
601: SNGVIPSTSG GDPVSSEKMK DLTGSLKQDD HIVKALTTSK KEKTILPGLE QVDVGKQISS QVSTKVVPGD SCNGRMTKRV DSKSKKLVRY PLMKLWLRPR
701: QLSLKQQKKK HKKTKKRVKD TASVDCSGDN SSEQQTSTSA TVPPKTAGST SRKRKHAHAS ASSENGTQVF KDSQQVVGAS SAGAGDHNMD ARNGKSQTSA
801: NQANSRNNVD AKRGAASQQV VIRTEDLRAE VTVPCWDDVA VPNSETSEYK SSGKKSIGYV LDEWDEEYDR GKAKKVRKAK EDDNDDGMNP FQAEANYVSA
901: RKTKQNSYKS KPWDKPARPS R
101: TCYLNSVLQC LTYTEPFAAY LQSGRHKSSC RTAGFCALCA LQNHVKTALR STGKIVTPSQ IVKNLRCISR SFRNSRQEDA HELMVNLLES MHKCCLPSGV
201: LSESASAYEK SLVHRIFGGR LRSQVKCTRC SHCSNTFDPF LDLSLDIGKA TTLVRALQNF TEDELLDGGQ KQYQCERCRQ KVVAKKRFTI DQAPNVLTVH
301: LKRFSPFRPR EKIDKKVDFQ PVLDLKPFMS DSKGADYKYS LYGVLVHAGW STQSGHYYCF VRTSSGMWHN LDDNQVRQVR EADVLKQKAY MLFYVRDRIG
401: NTLGRKDNST PNLPVNNMIP GKISSINGVM EAKSSGLTSP YANKKLQSTS NAHSSVSSMT LVDHCSTNAG KAETAAALQN SVLPAAQKAL GPQNDGATLS
501: TKSKQVASSS HKETSSSDQL ASSNQTMAKM SLQEPKTGGA LAKLGNNTSI ASSMVSGPAG LSETDKQTSC SQTCSKPSSN LVGTITGFTA QTFQTKDAVL
601: SNGVIPSTSG GDPVSSEKMK DLTGSLKQDD HIVKALTTSK KEKTILPGLE QVDVGKQISS QVSTKVVPGD SCNGRMTKRV DSKSKKLVRY PLMKLWLRPR
701: QLSLKQQKKK HKKTKKRVKD TASVDCSGDN SSEQQTSTSA TVPPKTAGST SRKRKHAHAS ASSENGTQVF KDSQQVVGAS SAGAGDHNMD ARNGKSQTSA
801: NQANSRNNVD AKRGAASQQV VIRTEDLRAE VTVPCWDDVA VPNSETSEYK SSGKKSIGYV LDEWDEEYDR GKAKKVRKAK EDDNDDGMNP FQAEANYVSA
901: RKTKQNSYKS KPWDKPARPS R
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.