Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G147900.1 | Wheat | nucleus | 91.29 | 92.18 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 92.58 | 91.69 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 92.26 | 91.57 |
| Os06t0184300-01 | Rice | mitochondrion | 66.34 | 66.77 |
| EER89337 | Sorghum | nucleus | 62.37 | 63.25 |
| Zm00001d045104_P005 | Maize | nucleus | 59.46 | 61.24 |
| KRH72298 | Soybean | cytosol, plastid | 27.96 | 51.18 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 31.72 | 49.17 |
| CDY02782 | Canola | nucleus | 34.62 | 40.2 |
| CDX88651 | Canola | nucleus, plastid | 35.16 | 39.68 |
| CDY11838 | Canola | nucleus, plastid | 34.73 | 39.44 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 35.16 | 39.35 |
| CDY57464 | Canola | nucleus | 35.81 | 39.27 |
| CDY32735 | Canola | nucleus | 33.55 | 38.95 |
| CDY55010 | Canola | nucleus | 34.95 | 38.24 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 36.45 | 37.92 |
| Bra020400.1-P | Field mustard | nucleus | 33.76 | 37.7 |
| AT5G57990.1 | Thale cress | nucleus | 34.52 | 37.37 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 38.71 | 37.27 |
| Solyc07g005530.2.1 | Tomato | nucleus | 36.77 | 37.05 |
| KRH03060 | Soybean | nucleus | 35.81 | 36.88 |
| PGSC0003DMT400028924 | Potato | nucleus | 36.56 | 36.72 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 38.6 | 36.01 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 31.72 | 34.75 |
| Bra002683.1-P | Field mustard | nucleus | 35.7 | 33.81 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 10.97 | 27.87 |
| HORVU1Hr1G077630.2 | Barley | plastid | 16.02 | 22.96 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 10.22 | 22.95 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 10.0 | 22.79 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 18.06 | 22.73 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 15.16 | 19.13 |
| HORVU2Hr1G114330.1 | Barley | cytosol | 11.4 | 18.93 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 17.2 | 15.22 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 15.7 | 14.7 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 10.65 | 13.04 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | UniProt:A0A287VX66 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:HORVU7Hr1G030300 | EnsemblPlants:HORVU7Hr1G030300.1 | InterPro:IPR028889 |
| PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI000B471992 | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:59718542..59725570
Molecular Weight (calculated)
100806.0 Da
IEP (calculated)
9.997
GRAVY (calculated)
-0.598
Length
930 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVSAAAAP VPEGVLHRRI EFHPARRPHA AVAVGGGGFQ METLNPDAAD GAAAAAGGAA RGEAEARRSE KAEALGLDPE LTVARIYLGR IGAGLQNLGN
101: TCYLNSVLQC LTYTEPFAAY LQSGRHKSSC RTAGFCALCA LQNHVKTALQ STGKIVTPSQ IVKNLRCISR SFRNSRQEDA HELMVNLLES MHKCCLPSGV
201: PSESASAYEK SLVHRIFGGR LRSQVKCTRC SHCSNTFDPF LDLSLDIGKA TTLVRALQNF TEDELLDGGQ KQYQCERCRQ KVVAKKRFTI DRAPNVLTVH
301: LKRFSPFRPR EKIDKKVDFQ PVLDLKPFMS DSKGADYKYS LYGVLVHAGW STQSGHYYCF VRTSSGMWHN LDDNQVRQVR EPDVLKQKAY MLFYVRDRIG
401: NTLGCKDNIT PNLPVNKVIP GKISSINGAI RSGVMEAKSS GLTSPYANKK LQSTSNAHSS VSNMTLVDHC STNDGKAETA AAPQNSVLPA AQKALGPQND
501: GVTLSTKSKQ VASSNHKETS SSGQPASSNQ TMAKMSLQEP KAGGAFAKLG NNTSIVSSMV SGPAGLSETD KQTSCAQTCS KPSLNLVGTI TGFTTQTFQT
601: KDAVVSNGVI PSTSGGGPVS SEKMKDLTGS LKQDDRTVKA LTMSKEKTLL PGLEQVDVGK QISSQVSTKV VPGDSCNGRM TKRVDSKSKK LVRYPVIKLW
701: LRPRQLPLKQ QKKKHKRTKK HAIVKDTASV DCSGDNSSEQ QTSTSATVPP KTAECTSRKR KHSHASVSSE NDTKAFKDSQ QVVGASSAGA GDHNMDTRNS
801: KSGTSASTGL PKLGSSSSAN QAHSRNNVDA KRQVVIHTED LRAEVTVPCW DDVAVPNTET IEYRSSGKKS IGYVLDEWDE EYDRGKAKKV RKAKEDEDDD
901: GTNPFQAEAN HVSARKEKQR PWSKPARPRR
101: TCYLNSVLQC LTYTEPFAAY LQSGRHKSSC RTAGFCALCA LQNHVKTALQ STGKIVTPSQ IVKNLRCISR SFRNSRQEDA HELMVNLLES MHKCCLPSGV
201: PSESASAYEK SLVHRIFGGR LRSQVKCTRC SHCSNTFDPF LDLSLDIGKA TTLVRALQNF TEDELLDGGQ KQYQCERCRQ KVVAKKRFTI DRAPNVLTVH
301: LKRFSPFRPR EKIDKKVDFQ PVLDLKPFMS DSKGADYKYS LYGVLVHAGW STQSGHYYCF VRTSSGMWHN LDDNQVRQVR EPDVLKQKAY MLFYVRDRIG
401: NTLGCKDNIT PNLPVNKVIP GKISSINGAI RSGVMEAKSS GLTSPYANKK LQSTSNAHSS VSNMTLVDHC STNDGKAETA AAPQNSVLPA AQKALGPQND
501: GVTLSTKSKQ VASSNHKETS SSGQPASSNQ TMAKMSLQEP KAGGAFAKLG NNTSIVSSMV SGPAGLSETD KQTSCAQTCS KPSLNLVGTI TGFTTQTFQT
601: KDAVVSNGVI PSTSGGGPVS SEKMKDLTGS LKQDDRTVKA LTMSKEKTLL PGLEQVDVGK QISSQVSTKV VPGDSCNGRM TKRVDSKSKK LVRYPVIKLW
701: LRPRQLPLKQ QKKKHKRTKK HAIVKDTASV DCSGDNSSEQ QTSTSATVPP KTAECTSRKR KHSHASVSSE NDTKAFKDSQ QVVGASSAGA GDHNMDTRNS
801: KSGTSASTGL PKLGSSSSAN QAHSRNNVDA KRQVVIHTED LRAEVTVPCW DDVAVPNTET IEYRSSGKKS IGYVLDEWDE EYDRGKAKKV RKAKEDEDDD
901: GTNPFQAEAN HVSARKEKQR PWSKPARPRR
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.