Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g005530.2.1 | Tomato | nucleus | 92.87 | 93.17 |
| KRH72298 | Soybean | cytosol, plastid | 32.83 | 59.84 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 33.37 | 51.5 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 45.14 | 46.76 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 49.24 | 45.74 |
| KRH03060 | Soybean | nucleus | 44.06 | 45.18 |
| CDY11838 | Canola | nucleus, plastid | 38.55 | 43.59 |
| CDX88651 | Canola | nucleus, plastid | 38.44 | 43.2 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 38.44 | 42.84 |
| CDY55010 | Canola | nucleus | 37.58 | 40.94 |
| CDY57464 | Canola | nucleus | 37.47 | 40.92 |
| CDY02782 | Canola | nucleus | 34.77 | 40.2 |
| AT5G57990.1 | Thale cress | nucleus | 37.15 | 40.05 |
| CDY32735 | Canola | nucleus | 34.13 | 39.45 |
| Bra020400.1-P | Field mustard | nucleus | 34.88 | 38.78 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 40.28 | 38.61 |
| Os06t0184300-01 | Rice | mitochondrion | 37.8 | 37.88 |
| Zm00001d045104_P005 | Maize | nucleus | 36.29 | 37.21 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 36.5 | 36.7 |
| EER89337 | Sorghum | nucleus | 36.29 | 36.64 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 36.72 | 36.56 |
| Bra002683.1-P | Field mustard | nucleus | 38.66 | 36.46 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 36.72 | 36.21 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 36.39 | 35.97 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 30.56 | 33.33 |
| TraesCS6D01G339500.1 | Wheat | nucleus | 35.53 | 31.85 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 35.53 | 30.78 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 35.53 | 30.72 |
| PGSC0003DMT400093121 | Potato | cytosol | 9.4 | 30.1 |
| Os02t0795000-01 | Rice | nucleus | 36.93 | 28.86 |
| PGSC0003DMT400093591 | Potato | cytosol | 7.13 | 26.29 |
| PGSC0003DMT400032703 | Potato | nucleus | 9.94 | 25.14 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 9.4 | 25.0 |
| PGSC0003DMT400089939 | Potato | cytosol | 10.04 | 24.87 |
| PGSC0003DMT400046008 | Potato | cytosol | 14.04 | 24.48 |
| PGSC0003DMT400071055 | Potato | mitochondrion | 15.98 | 23.95 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 3.67 | 22.82 |
| PGSC0003DMT400038315 | Potato | nucleus | 10.91 | 22.54 |
| PGSC0003DMT400033182 | Potato | cytosol | 3.35 | 21.99 |
| PGSC0003DMT400045160 | Potato | nucleus | 16.41 | 21.35 |
| PGSC0003DMT400033184 | Potato | cytosol | 4.21 | 21.31 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 3.56 | 19.76 |
| PGSC0003DMT400086994 | Potato | cytosol | 2.81 | 19.55 |
| PGSC0003DMT400088084 | Potato | cytosol | 7.02 | 19.35 |
| PGSC0003DMT400034298 | Potato | cytosol | 10.8 | 18.73 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 5.62 | 14.65 |
| PGSC0003DMT400063184 | Potato | plastid | 2.16 | 8.97 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | MEROPS:C19.A12 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:M1ARW7 | PFAM:PF00443 |
| EnsemblPlantsGene:PGSC0003DMG400011136 | PGSC:PGSC0003DMG400011136 | EnsemblPlants:PGSC0003DMT400028924 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR44033 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002948721 | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400011136]
Coordinates
chr7:+:740937..749584
Molecular Weight (calculated)
101509.0 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.586
Length
926 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRMEENLGQ ELSGLIGSDP GLDTSSSSLF HRKIEFHLAK KPFNGFISGK NNGGFQLETL NPSSETRKEN GSLVSGKKGG GDVVMESNGM DPELSFGIAF
101: RKIMRIGAGL QNLGNTCFLN SVLQCLTYTE PLAAYLESGK HQSSCRMAGF CALCAIQKHV SRALQATGKI LAPKDLVSNL RCISRNFRNA RQEDAHEYMV
201: NLLESMHKCC LPSGVSSESP SAYEKSLVHK IFGGRLRSQV QCMQCKFCSD KFDPFLDLSL EILRADSLLK ALDHFTAREL LDGGQKQYQC QQCKQKVKAT
301: KRLTIDQAPH VLTVHLKRFG SHVPGQKIDK KIHYGPTLDL KHFVSDTYSG ELKYTLYGVL VHAGWSTHSG HYYCFVRTSS GNWYSLDDNQ VVQVSERKVL
401: EQKAYMLFYV RDKKSPVPKK SVDVARNDNV ITNGIGNKIY SNHSQRFKDT AQIGFHLKNE DSLSGTKDQR ETLSAEVSKG TSTKDLAPPK VNGAVVSGFS
501: SHGVAIQPEN LSKVQETGDS VKDPSVVDTN DGTSLLKAKP AVPVSNGAHR FDNKGGTRCG DSTSLPNGNV TIKELTCSAA KPFHCSSINS DKDPSTPDKL
601: LNKDKQVECS KADTNSRVVK DISNGSLGGP AVEVNNDVGQ RKAGAESSGV LSQPTMTSST EKVAIDKACL KAKKKSFKSR VIKMHLSFMI LDPALGLNRK
701: KKLKRMKHKI GKRKRSNPSS VDESNSDLGP STSKLSHTLI SSPMHSQRKK SKFGSNEKVS SLDTKTAGHN GDLLRNTVND ARVVNNGTVL VNDKQQQKSS
801: SLAPVGSQGV DNRQSTDSKE TKVVATRKGL LNMLTRGLES SVARWDDVEV RSLNGVEAQN GNCVTIGYIG DEWDEEYDTG KRRKIRSSKI EFGGPNLFQE
901: IASNKTKVKK ARLERSSSAN QPFRIL
101: RKIMRIGAGL QNLGNTCFLN SVLQCLTYTE PLAAYLESGK HQSSCRMAGF CALCAIQKHV SRALQATGKI LAPKDLVSNL RCISRNFRNA RQEDAHEYMV
201: NLLESMHKCC LPSGVSSESP SAYEKSLVHK IFGGRLRSQV QCMQCKFCSD KFDPFLDLSL EILRADSLLK ALDHFTAREL LDGGQKQYQC QQCKQKVKAT
301: KRLTIDQAPH VLTVHLKRFG SHVPGQKIDK KIHYGPTLDL KHFVSDTYSG ELKYTLYGVL VHAGWSTHSG HYYCFVRTSS GNWYSLDDNQ VVQVSERKVL
401: EQKAYMLFYV RDKKSPVPKK SVDVARNDNV ITNGIGNKIY SNHSQRFKDT AQIGFHLKNE DSLSGTKDQR ETLSAEVSKG TSTKDLAPPK VNGAVVSGFS
501: SHGVAIQPEN LSKVQETGDS VKDPSVVDTN DGTSLLKAKP AVPVSNGAHR FDNKGGTRCG DSTSLPNGNV TIKELTCSAA KPFHCSSINS DKDPSTPDKL
601: LNKDKQVECS KADTNSRVVK DISNGSLGGP AVEVNNDVGQ RKAGAESSGV LSQPTMTSST EKVAIDKACL KAKKKSFKSR VIKMHLSFMI LDPALGLNRK
701: KKLKRMKHKI GKRKRSNPSS VDESNSDLGP STSKLSHTLI SSPMHSQRKK SKFGSNEKVS SLDTKTAGHN GDLLRNTVND ARVVNNGTVL VNDKQQQKSS
801: SLAPVGSQGV DNRQSTDSKE TKVVATRKGL LNMLTRGLES SVARWDDVEV RSLNGVEAQN GNCVTIGYIG DEWDEEYDTG KRRKIRSSKI EFGGPNLFQE
901: IASNKTKVKK ARLERSSSAN QPFRIL
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.