Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G339500.1 | Wheat | nucleus | 87.21 | 90.42 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 89.54 | 89.71 |
| Os02t0795000-01 | Rice | nucleus | 54.53 | 49.28 |
| KRH72298 | Soybean | cytosol, plastid | 23.25 | 49.02 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 40.8 | 47.45 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 25.4 | 45.33 |
| CDY11838 | Canola | nucleus, plastid | 28.01 | 36.63 |
| KRH03060 | Soybean | nucleus | 30.81 | 36.54 |
| CDY57464 | Canola | nucleus | 28.85 | 36.44 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 32.68 | 36.23 |
| CDX88651 | Canola | nucleus, plastid | 27.82 | 36.16 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 30.16 | 36.13 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 27.82 | 35.86 |
| CDY32735 | Canola | nucleus | 26.7 | 35.71 |
| CDY02782 | Canola | nucleus | 26.7 | 35.71 |
| PGSC0003DMT400028924 | Potato | nucleus | 30.72 | 35.53 |
| Solyc07g005530.2.1 | Tomato | nucleus | 30.53 | 35.43 |
| CDY55010 | Canola | nucleus | 28.01 | 35.29 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 32.68 | 35.11 |
| Bra020400.1-P | Field mustard | nucleus | 27.08 | 34.81 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 26.98 | 34.04 |
| AT5G57990.1 | Thale cress | nucleus | 26.7 | 33.29 |
| Bra002683.1-P | Field mustard | nucleus | 29.04 | 31.67 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 9.52 | 27.87 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 8.87 | 25.68 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 16.81 | 24.52 |
| TraesCS2A01G516100.1 | Wheat | mitochondrion | 8.4 | 24.32 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 8.68 | 22.79 |
| TraesCS1A01G329200.2 | Wheat | plastid | 13.45 | 22.19 |
| TraesCS1A01G192900.1 | Wheat | cytosol | 11.48 | 18.36 |
| TraesCS7A01G282200.4 | Wheat | plastid | 13.45 | 14.56 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 14.29 | 14.43 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 12.32 | 13.72 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 12.51 | 13.67 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 9.43 | 13.5 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| EnsemblPlantsGene:TraesCS6A01G357500 | EnsemblPlants:TraesCS6A01G357500.1 | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd02661 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:587856141..587862468
Molecular Weight (calculated)
116615.0 Da
IEP (calculated)
7.800
GRAVY (calculated)
-0.558
Length
1071 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEAAAAHRR IQFHASARQG AGAGAAGGAP MQRPYPNPDR RLALAAAEAR EKKGEAGAGG LDRELAAKVY LRTIGAGLRN LGNTCYLNSV LQCLTYTEPF
0101: VAYLQSGKHT SSSCRAAGFC ALCALQNHVR CALQSTGKIL TPVQFVKNLK CISRSFRYYR QEDAHELMVN LLESMHKCCL PSGIPSQSPS AYENSLVHRI
0201: FGGRLRSQVR CASCSHCSSK FDPFLDLSLE IANAATLLKA LQNFTEEEAL DGGEKQYNCQ SCKKKVVAKK RFTIDKAPDV LTIHLKRFSP FNPGQKINKK
0301: VDFQSTLNLK PFVSNSEGMD FRYSLYGVLV HAGWNTQSGH YYCFVRTSSG IWHNLDDNEV CQVREADVLR QKAYMLFYVR DRVRSSVMFK NNGATGSLVK
0401: NAISEKTANM NGTIRNGLME AKLNVPSFTN GDVKSQKQNP DDGRPSIFGS SSQGQCSKYS SSTGVIEAAA VQNNGVQNNG MVSVQTAAAT LSINTTKTTS
0501: DSEREIVSSA QPDVIVPHNS SCDPKAYEKP LQEQQPESDG AFTDSGKGST AALPICNGSD GMLEENHQAS EPRTDPCGEQ TLNTSKPAES AEIKKTKDMM
0601: LSVSNGTMSS REDLTCCNEA KESAESGKEP DKIAMEELSV ENTGAITNAV EQTSVQTNTV EVGQATVEEL SVKDADSIAN AXXQASMQNN DLVAGQAHPE
0701: THFYSELSAQ ALCPEISAQA ICPEISPRAI CPEVSPRVTC PEVSAHAICP ELSVQAICPE VSSQAVCPEV SPQAVCPEVS TQAVCPEVSA QAVCPEASAQ
0801: VICPEDPAQV LDKDPCHGNL HTMKDLKSKK HKDYSTVHLL FVSKQPLLAA LKLHKKRKHK RAKRQSIDNG IIADDQQTST SETVFTKDIS CKSHRRRKRS
0901: RAAASSDNGV EISTKKPHLA ERPSSAADLP VDKKDDKDAT LASAELPDAC VSSVADQIDS RNSAHANEGV PRHFDLLTRG LREIPVPLWD GIDMSDRKAT
1001: EFQYPRRTDS IGYVLDEWDE GYDRGKRKKV RKPREEPNGP NPFQEAADVR ARPRKRPRSD QARWGNQPRR I
0101: VAYLQSGKHT SSSCRAAGFC ALCALQNHVR CALQSTGKIL TPVQFVKNLK CISRSFRYYR QEDAHELMVN LLESMHKCCL PSGIPSQSPS AYENSLVHRI
0201: FGGRLRSQVR CASCSHCSSK FDPFLDLSLE IANAATLLKA LQNFTEEEAL DGGEKQYNCQ SCKKKVVAKK RFTIDKAPDV LTIHLKRFSP FNPGQKINKK
0301: VDFQSTLNLK PFVSNSEGMD FRYSLYGVLV HAGWNTQSGH YYCFVRTSSG IWHNLDDNEV CQVREADVLR QKAYMLFYVR DRVRSSVMFK NNGATGSLVK
0401: NAISEKTANM NGTIRNGLME AKLNVPSFTN GDVKSQKQNP DDGRPSIFGS SSQGQCSKYS SSTGVIEAAA VQNNGVQNNG MVSVQTAAAT LSINTTKTTS
0501: DSEREIVSSA QPDVIVPHNS SCDPKAYEKP LQEQQPESDG AFTDSGKGST AALPICNGSD GMLEENHQAS EPRTDPCGEQ TLNTSKPAES AEIKKTKDMM
0601: LSVSNGTMSS REDLTCCNEA KESAESGKEP DKIAMEELSV ENTGAITNAV EQTSVQTNTV EVGQATVEEL SVKDADSIAN AXXQASMQNN DLVAGQAHPE
0701: THFYSELSAQ ALCPEISAQA ICPEISPRAI CPEVSPRVTC PEVSAHAICP ELSVQAICPE VSSQAVCPEV SPQAVCPEVS TQAVCPEVSA QAVCPEASAQ
0801: VICPEDPAQV LDKDPCHGNL HTMKDLKSKK HKDYSTVHLL FVSKQPLLAA LKLHKKRKHK RAKRQSIDNG IIADDQQTST SETVFTKDIS CKSHRRRKRS
0901: RAAASSDNGV EISTKKPHLA ERPSSAADLP VDKKDDKDAT LASAELPDAC VSSVADQIDS RNSAHANEGV PRHFDLLTRG LREIPVPLWD GIDMSDRKAT
1001: EFQYPRRTDS IGYVLDEWDE GYDRGKRKKV RKPREEPNGP NPFQEAADVR ARPRKRPRSD QARWGNQPRR I
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.