Factsheet for TraesCS2A01G127200.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G129600.2	Wheat	cytosol	91.31	88.59
TraesCS2B01G149000.2	Wheat	cytosol	90.78	88.07
HORVU2Hr1G022340.2	Barley	cytosol	86.5	85.24
Os07t0661300-01	Rice	cytosol, plasma membrane	46.93	71.78
Zm00001d022414_P001	Maize	cytosol	51.74	70.11
GSMUA_Achr1P11380_001	Banana	cytosol	32.09	64.34
CDX72275	Canola	cytosol	29.81	60.27
GSMUA_Achr8P09770_001	Banana	cytosol	32.35	56.54
Bra024037.1-P	Field mustard	cytosol	30.08	56.25
OQU90420	Sorghum	mitochondrion	51.74	52.51
KRH39864	Soybean	cytosol	36.63	51.5
KRH23933	Soybean	cytosol	36.63	50.65
Solyc01g068240.2.1	Tomato	cytosol	34.89	48.97
PGSC0003DMT400034298	Potato	cytosol	34.89	48.88
VIT_13s0019g01690.t01	Wine grape	cytosol	36.1	48.82
CDY23262	Canola	nucleus	35.7	48.81
Solyc11g065210.1.1	Tomato	cytosol	34.76	48.69
AT4G30890.2	Thale cress	cytosol	35.43	48.09
PGSC0003DMT400033184	Potato	cytosol	11.63	47.54
Bra010268.1-P	Field mustard	cytosol	35.96	47.28
PGSC0003DMT400033175	Potato	mitochondrion	10.43	46.71
PGSC0003DMT400033182	Potato	cytosol	8.69	46.1
CDY36465	Canola	cytosol	35.7	45.49
CDY28224	Canola	endoplasmic reticulum, vacuole	35.7	45.25
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	35.7	45.25
CDX68701	Canola	endoplasmic reticulum, extracellular	35.43	44.39
PGSC0003DMT400033173	Potato	mitochondrion	17.25	36.34
Zm00001d007096_P007	Maize	mitochondrion	51.34	32.46
TraesCS4A01G406600.1	Wheat	cytosol	12.43	25.41
TraesCS2A01G340100.1	Wheat	cytosol	11.63	23.51
TraesCS6A01G203500.1	Wheat	nucleus, plastid	12.03	22.06
TraesCS2A01G516100.1	Wheat	mitochondrion	10.43	21.08
TraesCS1A01G329200.2	Wheat	plastid	11.5	13.25
TraesCS6A01G264800.1	Wheat	nucleus	12.3	12.53
TraesCS7A01G147900.1	Wheat	nucleus	13.77	11.18
TraesCS1A01G192900.1	Wheat	cytosol	9.89	11.04
TraesCS7A01G282200.4	Wheat	plastid	13.77	10.41
TraesCS5A01G246000.3	Wheat	vacuole	13.37	10.39
TraesCS6A01G192600.1	Wheat	plasma membrane	13.5	10.31
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	13.5	9.53
TraesCS6A01G357500.1	Wheat	mitochondrion, nucleus	13.5	9.43

Protein Annotations

MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR44747	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	EnsemblPlantsGene:TraesCS2A01G127200
EnsemblPlants:TraesCS2A01G127200.3	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:75137501..75142281

Molecular Weight (calculated)

79790.6 Da

IEP (calculated)

9.697

GRAVY (calculated)

-0.380

Length

748 amino acids

Sequence
(BLAST)

001: MSGADKVVLF GSFTEDETKL FQGQPAKSEE KSWELPEIQF GSLNFSVLSL EKASNAITEG SAHSPKPTYG HTKDHAGSNK KETVTSTLPN GGPVLFNGFP
101: AEVSPNNGIL KNVKSEASVP SAGPVSNLKE NKATVALAGP VNNVKKTEAQ VPSARPVNDV KKNEALALSP GPINNVKKDA TVPSAGPVNN VKKDAAVPSA
201: GPVNNVKKAK ATAPSAGPAN NVKKAEATPP SALSANNVKK AEPTVPSARP VNNVKKAEAT IPSPVPVNNV KKAEATVPSP RPVNNVKKAE ATVPSPRPVN
301: NEKKAEATVP SPGPANTVKK TESVVPSVAP IKSISSSTPI EGPGPHHDGL RCTESSSSAM LVTENGSTGA DAPIIAAPAD DSVTSLNKED YQNKPLLPHG
401: LKNTGNICFL NATLQAFLSC FPFVQLVQGL RNRSIPKAGY PTLSAFIELV SQFDVLDEST MKDERFALVA AKIINPTMFD QVLRNFTPDV PAGTSARPRQ
501: EDAQEFLSFA MDRMHDELLR LNGNGSNSKE GMVVSSDDDD AWETVGRKNK SAIMRTQSFV PSDLSAIFGG KLQSVVKAAG NKASATVQPF LLLHLDIFPD
601: AVQTLDDALH LFSTPESLEG YRTTAGKAGV VTARKSFKIH ELSKIMILHL KRFSYGNRGC TKLYKPLHFP LELVLNRDLL SSPSSEGRRY ELVATITHHG
701: SGPSRGHYTA DAKHDGGQWL RFDDGHVMPI NVNKVLHNPA YILFYKQV

Best Arabidopsis Sequence Match ( AT4G30890.3 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.