Factsheet for TraesCS2D01G129600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G149000.2	Wheat	cytosol	96.11	96.11
TraesCS2A01G127200.3	Wheat	cytosol	88.59	91.31
HORVU2Hr1G022340.2	Barley	cytosol	87.29	88.67
Os07t0661300-01	Rice	cytosol, plasma membrane	45.01	70.96
Zm00001d022414_P001	Maize	cytosol	50.58	70.65
GSMUA_Achr1P11380_001	Banana	cytosol	31.26	64.61
CDX72275	Canola	cytosol	28.79	60.0
GSMUA_Achr8P09770_001	Banana	cytosol	31.26	56.31
Bra024037.1-P	Field mustard	cytosol	29.18	56.25
OQU90420	Sorghum	mitochondrion	50.71	53.05
KRH39864	Soybean	cytosol	35.54	51.5
KRH23933	Soybean	cytosol	35.41	50.46
Solyc01g068240.2.1	Tomato	cytosol	33.72	48.78
VIT_13s0019g01690.t01	Wine grape	cytosol	34.76	48.46
CDY23262	Canola	nucleus	34.37	48.45
PGSC0003DMT400034298	Potato	cytosol	33.46	48.31
Solyc11g065210.1.1	Tomato	cytosol	33.33	48.13
AT4G30890.2	Thale cress	cytosol	34.37	48.09
Bra010268.1-P	Field mustard	cytosol	34.63	46.92
PGSC0003DMT400033184	Potato	cytosol	11.02	46.45
PGSC0003DMT400033175	Potato	mitochondrion	9.99	46.11
PGSC0003DMT400033182	Potato	cytosol	8.43	46.1
CDY36465	Canola	cytosol	34.63	45.49
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	34.63	45.25
CDY28224	Canola	endoplasmic reticulum, vacuole	34.63	45.25
CDX68701	Canola	endoplasmic reticulum, extracellular	34.37	44.39
PGSC0003DMT400033173	Potato	mitochondrion	16.47	35.77
Zm00001d007096_P007	Maize	mitochondrion	50.97	33.22
TraesCS4D01G304300.1	Wheat	cytosol	12.19	25.68
TraesCS7D01G125700.1	Wheat	nucleus	12.06	25.41
TraesCS6D01G187000.1	Wheat	nucleus, plastid	11.8	22.3
TraesCS2D01G517600.1	Wheat	mitochondrion	10.12	21.08
TraesCS1D01G331300.1	Wheat	plastid	11.28	13.47
TraesCS1D01G196500.1	Wheat	cytosol	9.73	13.3
TraesCS6D01G250100.1	Wheat	nucleus	11.93	12.45
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	13.1	11.16
TraesCS7D01G149800.1	Wheat	nucleus	13.23	10.89
TraesCS6D01G179700.1	Wheat	plasma membrane	12.97	10.24
TraesCS7D01G280800.4	Wheat	plastid	12.71	9.88
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	12.71	9.2
TraesCS6D01G339500.1	Wheat	nucleus	12.32	9.2
TraesCS1D01G196600.1	Wheat	nucleus	10.25	9.07

Protein Annotations

MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	EnsemblPlantsGene:TraesCS2D01G129600	EnsemblPlants:TraesCS2D01G129600.2
InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:75392207..75396400

Molecular Weight (calculated)

82596.1 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.362

Length

771 amino acids

Sequence
(BLAST)

001: MEVCVIRWDP ELSFLRPDSR RESRIEAVVL FGSFTEDETK LFQGQPTKSE EKSWELPEIQ FGSLNFSVLS LEKVSNAITE GSAHSPKPTY GHTKDLAGSS
101: KKEAVTSTLP NGGPVLFNGF PAEVSPNNGI LKNVKSEASV PSSGPVSNLK ETKATVALAG PVNNVKKTEA PVPSARPVND VKKNEALALS PGPINNVKKE
201: ATVPSAGPVN NVKKTKATSP SAGPANNVKK TEATAPSAVS ANNVKKAEPT VPSARPANNV KKAEATVPSP VPVNNVKKAE ATVPSPGPVN NVKKAEATVP
301: SPRPVNNVKK AEATVPSPGP VNNVKKAEAT VPSPGPANTV KKTESVATSV APIKSISSST PIEGLGPHND GLRCTESSSS AMLVTENGST GADAPIIAAP
401: ADESVTSLNK EAYQNKPLLP HGLKNTGNIC FLNATLQAFL SCFPFVQLVQ DLRNRSIPKA GYPTLSAFIE LLSQFDVLDE STMKKDERFA LVAAKVINPT
501: MFDQVLRNFT PDVPAGTSAR PRQEDAQEFL SFAMDRMHDE LLRLNGNGSN SKEGMVVSSD DDDAWETVGR KNKSAIMRTH SFVPSDLSAI FGGKLQSVVK
601: AAGNKASATV QPFLLLHLDI FPDAVQTLDD ALHLFSTPES LEGYRTTAGK AGVVTARKSF KIHELSKIMI LHLKRFSYGN RGCTKLYKPL HFPLELVLNR
701: DLLSSPSSEG RRYELVATIT HHGSGPSRGH YTADAKRDGG QWLRFDDGHV MPINVNKVLH NPAYILFYKQ V

Best Arabidopsis Sequence Match ( AT4G30890.1 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.