Factsheet for Zm00001d007096_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022414_P001	Maize	cytosol	41.84	89.67
OQU90420	Sorghum	mitochondrion	48.18	77.34
Os07t0661300-01	Rice	cytosol, plasma membrane	28.15	68.1
GSMUA_Achr1P11380_001	Banana	cytosol	20.12	63.81
CDX72275	Canola	cytosol	19.02	60.81
GSMUA_Achr8P09770_001	Banana	cytosol	20.54	56.78
Bra024037.1-P	Field mustard	cytosol	19.1	56.5
TraesCS2A01G127200.3	Wheat	cytosol	32.46	51.34
HORVU2Hr1G022340.2	Barley	cytosol	32.71	50.99
TraesCS2D01G129600.2	Wheat	cytosol	33.22	50.97
KRH23933	Soybean	cytosol	22.99	50.28
KRH39864	Soybean	cytosol	22.57	50.19
TraesCS2B01G149000.2	Wheat	cytosol	32.38	49.68
VIT_13s0019g01690.t01	Wine grape	cytosol	23.08	49.37
PGSC0003DMT400034298	Potato	cytosol	22.23	49.25
Solyc01g068240.2.1	Tomato	cytosol	22.15	49.16
Solyc11g065210.1.1	Tomato	cytosol	22.06	48.88
CDY23262	Canola	nucleus	22.06	47.71
PGSC0003DMT400033182	Potato	cytosol	5.66	47.52
PGSC0003DMT400033184	Potato	cytosol	7.19	46.45
Bra010268.1-P	Field mustard	cytosol	22.32	46.4
AT4G30890.2	Thale cress	cytosol	21.39	45.92
CDY36465	Canola	cytosol	22.32	44.97
PGSC0003DMT400033175	Potato	mitochondrion	6.34	44.91
CDY28224	Canola	endoplasmic reticulum, vacuole	22.06	44.24
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	22.06	44.24
CDX68701	Canola	endoplasmic reticulum, extracellular	22.06	43.72
PGSC0003DMT400033173	Potato	mitochondrion	10.4	34.65
Zm00001d028005_P001	Maize	nucleus	7.78	25.14
Zm00001d025570_P003	Maize	nucleus	7.78	25.0
Zm00001d003476_P002	Maize	cytosol	7.78	25.0
Zm00001d000312_P002	Maize	plastid	5.66	23.84
Zm00001d016918_P001	Maize	plastid	7.86	22.3
Zm00001d002086_P001	Maize	plastid	8.28	17.41
Zm00001d051513_P001	Maize	nucleus	7.78	15.57
Zm00001d047023_P001	Maize	nucleus	6.93	13.2
Zm00001d010710_P002	Maize	plastid	7.61	13.18
Zm00001d050489_P001	Maize	nucleus	4.82	12.47
Zm00001d017686_P002	Maize	mitochondrion, nucleus	7.69	12.3
Zm00001d045104_P005	Maize	nucleus	8.79	11.52
Zm00001d020769_P005	Maize	nucleus	8.2	11.33
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	9.04	11.03
Zm00001d036707_P006	Maize	plasma membrane	8.71	10.75
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	9.13	10.74
Zm00001d000313_P001	Maize	nucleus	1.78	5.68

Protein Annotations

MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	UniProt:A0A1D6F3S5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
InterPro:IPR027356	InterPro:IPR028889	InterPro:NPH3_dom	ProteinID:ONM25988.1	PFAM:PF00443	PFAM:PF03000
ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PFscan:PS51649	PANTHER:PTHR44747	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0008448C19	InterPro:USP_CS	InterPro:USP_dom
EnsemblPlantsGene:Zm00001d007096	EnsemblPlants:Zm00001d007096_P007	EnsemblPlants:Zm00001d007096_T007	SEG:seg	:	:

Description

Ubiquitin carboxyl-terminal hydrolase

Coordinates

chr2:+:222237771..222248817

Molecular Weight (calculated)

131011.0 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.262

Length

1183 amino acids

Sequence
(BLAST)

0001: MAPSSARDSP VPVGRGSRIL TRFLLHYLRA ATRRPPTLER EGTALAGLAD TAVHGMALVE GTTECRHKLE RLMGLMLVQA TLDDLLVSSD DGGDVYIVNL
0101: VMRLVRVFVA SKEEADAPSE RMRKVGRLVD KYLDEISQDQ GLKVSKFLTV SESLPDSARD CYDGVYRVLD IYLKKIVQGG NEFVWSGFDL TIYLEGFDRM
0201: AYPKTALLTR MANMLIQMSL QNPLTLAHPE LNCQTFDRHL SNILMPQLLL KLKSHWMEDY TNPDLFVNQI IIEGIVQLEK DLKEQQVVQG AVENTLGAGS
0301: INLLLENPIP KDQHPLHQCE AKWWTIPRPV DNCRWEGRHG SLAPLPQQRP PAPFLARREM DRRIHGSLVS PPLVLPGPPL HDTRPQPLLR CGEVPPPRPD
0401: APKTWSKSTS MMHADSGLVG TSRWSTASFL KMVWSYTNLW GEISASASFC EVDLDSAAQK NGGFSSPPLP PPQAMAGVKL QQRQLRPMSH VGPFTAPFFF
0501: YSLLVAFLFF SLVRMAELRL LGQGGLSQRF LKVVSYYGLT TLPYKLVCKL VGANLRRSRI ITFSGNRCNQ KVVAYLREPY NYWGMVGFGL LNFEHHDLTK
0601: NEVQYQSEEP PRGLPSGRFR SPAIGLPTAA EMSGGEKMLL FGSFTEDETK LFQGQPLKSP NKSVSKECER TEIQFGTLNF SVLSLEKVST SSVVLPAKSA
0701: NSETSAITKE NTCSNEKKAA GSSLPNGRAI LANGCPPVNV PANNDLFENV KKTEAVVPPV VPVKSISNPT PQMTLEVHND GTEPTQSRKL DKEREITENG
0801: SPIVDTPIAA APAEEAVTNL NKKTSQNMPL IPQGLRNTGN ICFLNATLQA LLSCSPFVHL LQDLRNRSIP KFGYPTLRAF VELISQFDVL DESVNKKKEK
0901: ATTVAAKPLN PAMFDDVLRN FTPDVPAGIT ARPRQEDAQE FLSFAMDRVH DELLKLNGNG LDSKEGMVVS SSADDAWETV GRKNKSAIVR THSFVPSELS
1001: AIFGGQLQSV VKAAGNKASA TVQPFLLLHL DIFPDAVQTL NDALRLFSTP ESLEGYRTTA GKAGLVTARK SFKIHALPKI MILHLKRFSY GNNGSTKIYK
1101: PLGFTSELVL SRDLLSSPSQ EGRKYELVAT ITHHGRDPYR GHYTAHAKHA DGQWLRFDDD AVVPVGENDV LHDQAYVLFY KQV

Best Arabidopsis Sequence Match ( AT4G30890.3 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.