Factsheet for PGSC0003DMT400076065

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P05090_001	Banana	vacuole	61.78	46.04
Solyc08g069050.2.1	Tomato	extracellular	97.41	43.63
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	63.79	35.18
CDY45587	Canola	endoplasmic reticulum, vacuole	63.79	35.07
CDY20330	Canola	vacuole	63.79	34.53
CDY34761	Canola	endoplasmic reticulum, vacuole	63.51	34.32
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	62.64	33.49
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	64.08	33.18
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	60.06	33.12
CDX75188	Canola	vacuole	56.03	31.91
Bra011290.1-P	Field mustard	vacuole	55.46	31.54
CDX68773	Canola	nucleus, plasma membrane	55.17	31.27
KRH15706	Soybean	golgi, plasma membrane, vacuole	64.94	31.0
KRH05330	Soybean	golgi, plasma membrane	65.23	30.8
KRH61621	Soybean	golgi	63.51	29.78
Bra007837.1-P	Field mustard	nucleus	42.82	29.22
KRH52289	Soybean	golgi	61.21	29.02
VIT_04s0069g00760.t01	Wine grape	nucleus	62.36	25.12
Zm00001d036707_P006	Maize	plasma membrane	56.03	20.35
KXG20513	Sorghum	golgi, plasma membrane	56.61	20.18
Os06t0654000-01	Rice	cytosol, nucleus	51.15	18.86
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	59.77	18.39
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	55.46	18.21
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	55.46	18.12
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	54.6	18.08
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	55.17	17.86
PGSC0003DMT400032703	Potato	nucleus	14.66	13.93
PGSC0003DMT400038315	Potato	nucleus	17.53	13.62
PGSC0003DMT400033182	Potato	cytosol	4.89	12.06
PGSC0003DMT400034298	Potato	cytosol	17.82	11.61
PGSC0003DMT400071055	Potato	mitochondrion	20.4	11.49
PGSC0003DMT400093121	Potato	cytosol	8.62	10.38
PGSC0003DMT400033175	Potato	mitochondrion	4.89	10.18
PGSC0003DMT400033184	Potato	cytosol	5.17	9.84
PGSC0003DMT400028924	Potato	nucleus	25.0	9.4
PGSC0003DMT400046008	Potato	cytosol	13.51	8.85
PGSC0003DMT400045160	Potato	nucleus	16.38	8.01
PGSC0003DMT400033173	Potato	mitochondrion	7.76	7.61
PGSC0003DMT400089939	Potato	cytosol	6.32	5.88
PGSC0003DMT400093591	Potato	cytosol	3.74	5.18
PGSC0003DMT400096420	Potato	mitochondrion	0.57	1.34
PGSC0003DMT400088084	Potato	cytosol	0.57	0.6
PGSC0003DMT400063184	Potato	plastid	0.0	0.0
PGSC0003DMT400086994	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.60.180	Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893	InterPro:IPR028889	UniProt:M1CW51	PFAM:PF00443
PFAM:PF01753	EnsemblPlantsGene:PGSC0003DMG400029580	PGSC:PGSC0003DMG400029580	EnsemblPlants:PGSC0003DMT400076065	ScanProsite:PS00972	ScanProsite:PS01360
PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232
SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI000296DFD4	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND
SEG:seg	:	:	:	:	:

Description

Cysteine-type endopeptidase [Source:PGSC_GENE;Acc:PGSC0003DMG400029580]

Coordinates

chr8:-:44809457..44813693

Molecular Weight (calculated)

38874.2 Da

IEP (calculated)

6.075

GRAVY (calculated)

-0.260

Length

348 amino acids

Sequence
(BLAST)

001: MHVAVDLNSY LQFVLTAIAV VVTLLYLVKS TASKYFVVDD DSNFESSASP TAGFGDRRMD PATPEGCAVC SNVTKKQCSR CKMVKYCSEA CQRSHWNSGH
101: KFKCKDLQLS GKGSSLQGRK SSAVSLTHAS GTSKILDHSK KVLFPYEEFL ELFNWDSPGF PPCGLLNCGN SCFANVVLQC LTYTKPLVAY LLEKGHLREC
201: RRNGWCFLCE FQHHVEWASR SQQPFSPINI LSRLPNIGGN LGYGKQEDAH EFMRFAIDMM QSVCLDEFGG EKAVPPNTQE TTLIQHIFGG HLQSQVMCTE
301: CSNVSNQFEN MMDLTVEIHG DAESLEECLD QFTAREWLDG DNLYKCDG

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.