CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61621	Soybean	golgi	89.78	88.81
KRH15706	Soybean	golgi, plasma membrane, vacuole	64.44	64.88
KRH05330	Soybean	golgi, plasma membrane	64.17	63.91
GSMUA_Achr7P05090_001	Banana	vacuole	39.78	62.53
PGSC0003DMT400076065	Potato	endoplasmic reticulum	29.02	61.21
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	45.78	53.25
CDY45587	Canola	endoplasmic reticulum, vacuole	45.64	52.92
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	45.37	52.77
CDY20330	Canola	vacuole	45.91	52.41
Bra011290.1-P	Field mustard	vacuole	43.32	51.96
CDX68773	Canola	nucleus, plasma membrane	43.32	51.79
CDX75188	Canola	vacuole	43.05	51.72
Bra007837.1-P	Field mustard	nucleus	35.69	51.37
CDY34761	Canola	endoplasmic reticulum, vacuole	44.55	50.78
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	44.82	50.54
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	45.23	49.4
Solyc08g069050.2.1	Tomato	extracellular	49.18	46.46
Solyc12g096430.1.1	Tomato	nucleus, plastid	36.51	43.09
VIT_04s0069g00760.t01	Wine grape	nucleus	48.77	41.44
Zm00001d036707_P006	Maize	plasma membrane	42.23	32.36
KXG20513	Sorghum	golgi, plasma membrane	42.92	32.27
Os06t0654000-01	Rice	cytosol, nucleus	41.28	32.1
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	43.73	30.54
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	44.28	30.52
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	43.87	30.38
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	44.41	30.33
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	45.91	29.8
KRH31299	Soybean	nucleus	13.49	26.83
KRG97572	Soybean	nucleus	13.49	26.83
KRH43175	Soybean	nucleus	13.49	26.83
KRH59329	Soybean	nucleus	13.49	26.83
KRH72298	Soybean	cytosol, plastid	17.98	25.98
KRH74502	Soybean	golgi, plasma membrane, vacuole	32.56	25.78
KRH69660	Soybean	golgi	32.83	25.69
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	32.15	23.84
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	32.02	23.76
KRH72452	Soybean	golgi, plasma membrane	32.02	22.68
KRH52893	Soybean	extracellular, golgi, vacuole	27.11	22.41
KRH16837	Soybean	golgi	31.61	22.2
KRH43852	Soybean	nucleus	18.53	21.22
KRH13611	Soybean	nucleus	18.53	20.86
KRH62182	Soybean	golgi, vacuole	32.02	20.65
KRH05289	Soybean	nucleus	14.71	19.46
KRH15753	Soybean	nucleus	14.31	18.95
KRH39864	Soybean	cytosol	13.22	18.23
KRH23933	Soybean	cytosol	13.22	17.93
KRH20191	Soybean	plastid	14.44	17.85
KRH03615	Soybean	cytosol	14.31	17.74
KRH74417	Soybean	nucleus	16.35	16.6
KRH03060	Soybean	nucleus	19.89	16.17
KRH39541	Soybean	nucleus	16.08	15.97

Protein Annotations

EntrezGene:100817913	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EMBL:ACUP02003415	EnsemblPlantsGene:GLYMA_06G059000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	UniProt:I1K8J2
InterPro:IPR002893	InterPro:IPR028889	EnsemblPlants:KRH52289	ProteinID:KRH52289	ProteinID:KRH52289.1	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0002339EA0	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:4451694..4457413

Molecular Weight (calculated)

82069.8 Da

IEP (calculated)

5.281

GRAVY (calculated)

-0.381

Length

734 amino acids

Sequence
(BLAST)

001: MLVLGVWDLK WLLQFVFSAF VLAIGLHALL KNTASKYFEI EATFHAMPGP LTDHSLCAVC RNPANKKCSR CKSVRYCSQA CQQAHWKSEH KMRCKEFQGS
101: ASVMNLDQTE VTNRVFKASA AVNTSTSSIA LIPECGRGTS RTIKQPKTVI YPYDEFVKLF NWDKPGFPPC GLKNCGNSCF ANVVLQCLSF TRPLIAFLLE
201: KGHHGECCHS DWCFLCEFET HVEKVRLSSQ AFSPMNILSR LPNISGTLGY GRQEDAHEFI RFAIDAMQSV CLDEFGGEKV VPPKHQETTL IQHIFGGHLQ
301: SEVICTECEK NSNQYENMMD LNVEIHGDAA SLEECLDQFT AKEWLHGDNM YKCDGCKGYV KAWKRLTVKR APNILTIALK RFQSGRFGKL NKRVTFPETL
401: DLSPYMSEAG DGSDIYKLYA VVVHIDMLNA SFFGHYICFI KDLCGNWYRI DDWKVSSVEL EEVLSQGAYM LLYSRVNARP SGLQSIELSE TAEVQTIKSK
501: VQPGWTEQAE CLSDMKSETY SYSRGYEAFP SDSSPELKVS CCESVTEMNS EIKREQSKDV DIIDVASESF CNGFETSHMH DSEAVKDLGD IDSDGSNTCS
601: SVLEEISVCM EEQDDNDNDM AKSSPCPHLP NGFSCFDKDS SVSVDYQNTR EDSGHKDVTK CKLTSNGFAN YSNGYGSANK YDDVPVEDGD GSFSTETPSA
701: KMHQLKERLA SENSEVDKGN GVKKVEISAN KLII

Best Arabidopsis Sequence Match ( AT4G31670.1 )
(BLAST)

001: MHEVGFPLDL SVFTRLIATL FFLAVGVFYF LKNTAAKYFD IGAAAAGGFD RDFMAVDAED CSVCGNFSTK KCSRCKSVRY CSAECQRSDW SSGHQRNCRD
101: YGITTLTPSA KNGLRFRASP FGDSSASSIA LISERGQNKS SLKPREVLFP YEEFVEYFNW DNPELAPCGL MNCGNSCFAN VILQCLSWTR PLVAYLLEKG
201: HKRECMRNDW CFLCEFQTHV ERASQSRFPF SPMNIISRLT NIGGTLGYGR QEDAHEFMRY AIDMMQSVCL DEFGGEKIVP PRSQETTLIQ YIFGGLLQSQ
301: VQCTVCNHVS DQYENMMDLI VEMHGDAGSL EECLDQFTAE EWLHGDNMYK CDRCSDYVKA CKRLTIRRAP NILTIALKRY QGGRYGKLNK RISFPETLDL
401: NPYMSEGGDG SDVYKLYAVI VHLDMLNASF FGHYICYIKD FCGNWYRIDD SEIESVELED VLSQRAYMLL YSRIQARSSS SCLRSEVKDE KKTDTLDTES
501: CVKELVESSM VGAIESRSST HATIEDPVCE QSPSPSPSPS PSPSPSPSPS VLASECCSEV ERIDTLDSES NSSIDDSATD HQEDVANGNK DPEVKYQAAD
601: SWSDPTTSTP LVCTKSKPPV RDMDTKMIDA Q

Arabidopsis Description

UBP18Ubiquitin carboxyl-terminal hydrolase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q67XW5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.