CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69660	Soybean	golgi	93.42	92.32
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	39.91	50.0
VIT_00s0199g00030.t01	Wine grape	vacuole	48.33	49.61
AT5G65450.2	Thale cress	endoplasmic reticulum, golgi, mitochondrion, nucleus	38.73	47.87
CDY08792	Canola	vacuole	37.54	46.46
CDY14564	Canola	golgi	37.65	45.8
Bra024386.1-P	Field mustard	golgi	37.76	45.63
GSMUA_Achr10P...	Banana	golgi	18.99	39.11
GSMUA_Achr5P22990_001	Banana	vacuole	37.65	38.82
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	15.97	38.34
Zm00001d050489_P001	Maize	nucleus	18.55	37.64
GSMUA_Achr10P...	Banana	nucleus	16.4	37.44
GSMUA_Achr7P19010_001	Banana	nucleus	18.23	36.74
KRH72452	Soybean	golgi, plasma membrane	40.02	35.81
KRH16837	Soybean	golgi	40.35	35.79
KRH52893	Soybean	extracellular, golgi, vacuole	33.98	35.47
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	28.05	35.28
KRH62182	Soybean	golgi, vacuole	41.96	34.18
OQU80649	Sorghum	nucleus	29.56	33.99
KRH15706	Soybean	golgi, plasma membrane, vacuole	26.21	33.33
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	33.33	33.3
GSMUA_AchrUn_...	Banana	golgi, vacuole	35.92	32.87
Solyc04g076210.2.1	Tomato	nucleus	38.94	32.85
KRH05330	Soybean	golgi, plasma membrane	26.11	32.84
KRH52289	Soybean	golgi	25.78	32.56
KRH61621	Soybean	golgi	26.0	32.48
Zm00001d020769_P005	Maize	nucleus	29.99	32.48
Os08t0478500-01	Rice	plastid	33.98	32.21
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	30.85	31.6
TraesCS5B01G243400.1	Wheat	vacuole	31.18	31.55
TraesCS7A01G282200.4	Wheat	plastid	33.33	31.24
TraesCS7B01G179000.2	Wheat	plastid	33.44	31.22
TraesCS7D01G280800.4	Wheat	plastid	33.01	30.85
OQU89635	Sorghum	vacuole	30.2	30.7
TraesCS5A01G246000.3	Wheat	vacuole	31.18	30.04
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	31.5	29.41
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	28.48	26.69
KRH72298	Soybean	cytosol, plastid	14.56	26.57
KRH59329	Soybean	nucleus	10.57	26.56
KRH43175	Soybean	nucleus	10.57	26.56
KRH31299	Soybean	nucleus	10.57	26.56
KRG97572	Soybean	nucleus	10.57	26.56
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	28.16	26.36
KRH23933	Soybean	cytosol	11.76	20.15
KRH15753	Soybean	nucleus	11.97	20.04
KRH39864	Soybean	cytosol	11.43	19.92
KRH20191	Soybean	plastid	12.73	19.87
KRH05289	Soybean	nucleus	11.87	19.82
KRH03615	Soybean	cytosol	12.41	19.43
KRH43852	Soybean	nucleus	13.27	19.19
KRH13611	Soybean	nucleus	13.38	19.02
KRH39541	Soybean	nucleus	13.48	16.91
KRH74417	Soybean	nucleus	13.16	16.87
KRH03060	Soybean	nucleus	16.07	16.5

Protein Annotations

EntrezGene:100792437	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EMBL:ACUP02000037	EnsemblPlantsGene:GLYMA_01G023900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	UniProt:K7K1E2	EnsemblPlants:KRH74502	ProteinID:KRH74502	ProteinID:KRH74502.1	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0002336EED	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:2433777..2442737

Molecular Weight (calculated)

103140.0 Da

IEP (calculated)

8.176

GRAVY (calculated)

-0.544

Length

927 amino acids

Sequence
(BLAST)

001: MLVPGILGFP GLVYLVLALG FAVIRHVWRN AEAKREEEAV MMMRLVADAD VTEMEVAEEA VAVASEVEYS SLAPVNGSRW YQCAMCCAPT TMRCSRCKAV
101: RYCSGKCQIS HWRQGHKDEC CPPTTTMELK DENLSSRASV SKTESGLHEI NGTHAGISSS NDSYSSLDPL VAARKSFDDN HRSRFAKPVC NDTTDDTSVA
201: SPHNKQTVNM KCSENIEVKD SSASKRSKSN HSNATDETRF KSKFPKTQSD TSHDEAANLG SHERRRKAAI VEKLAKDTSK CKTVPYLSGS SKYVVIDDVE
301: EESHLPKYRE ARRSSSSSRE RLSSATKGDF PSQSKCMETD NCHTLPAKVS AVPNLPQNVC SGLKISMQKV VQQFRSSKES RSNSISAENE MGFPYELFVE
401: LYCYDKMKLF PFGLTNCGNS CYANAVLQCL AYTRPLTSYL FQGFHSKRCQ KKGWCFTCEF EYLIQKAKEG ISPLSPIGIL SKIHKIGSHL GRGKEEDAHE
501: FLRCAVDTMQ SVCLKEVGVS SPLAEETTLV GYTFGGYLRS KIKCLRCLGK SERYERMMDL TVEIDGDIGT LEEALGQFTA PEILDKDNKY NCSRCKTYEK
601: ARKKLTVLEA PNILTIVLKR FQSGNFEKLN KSVQFPEVLN MAPYMSGTKD KSPLYSLYAV VVHLDIMNAA FSGHYVCYVK NIQGEWFRTD DSRVEPVELS
701: RVLSERAYML LYARHSPKPL GLVSSNVISS AGKFKRRNLE AIPASSKTRS NSMATSGESP SLQQKHGKYP NWNDGDDSLR NDFAYPEEWR FQYGGTNTMV
801: DSSSESSLFS SSDASSCSTA SIKDSASSAD FSDYIFGEVG PSWYSHYGLS SNMGASSSHD NLDTDFLVDS SGASRRRRQD SEDKAVLYAN KNKNRSGSRG
901: VDLKRYITAN HYDKNSGVHV RRISGDA

Best Arabidopsis Sequence Match ( AT5G65450.2 )
(BLAST)

001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD

Arabidopsis Description

UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.