Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24560.1 | EES08452 | AT4G13930.1 | 23232097 |
| AT4G24560.1 | OQU91027 | AT4G37930.1 | 23232097 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020769_P005 | Maize | nucleus | 76.21 | 81.19 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 42.43 | 52.51 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 50.0 | 49.14 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 46.27 | 46.07 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 45.61 | 45.97 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 46.38 | 43.97 |
| OQU80649 | Sorghum | nucleus | 38.27 | 43.3 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 21.16 | 41.96 |
| GSMUA_Achr10P... | Banana | nucleus | 18.2 | 40.89 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 15.13 | 35.75 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 35.2 | 35.71 |
| GSMUA_Achr10P... | Banana | golgi | 17.54 | 35.56 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 27.96 | 34.46 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 28.07 | 34.13 |
| CDY08792 | Canola | vacuole | 27.96 | 34.05 |
| CDY14564 | Canola | golgi | 28.4 | 33.99 |
| Bra024386.1-P | Field mustard | golgi | 28.07 | 33.38 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 31.25 | 31.56 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 30.7 | 30.2 |
| KRH69660 | Soybean | golgi | 30.26 | 29.42 |
| KRH16837 | Soybean | golgi | 32.68 | 28.52 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 27.3 | 28.04 |
| KRH72452 | Soybean | golgi, plasma membrane | 31.36 | 27.61 |
| CDY11021 | Canola | golgi | 29.17 | 26.36 |
| KRH62182 | Soybean | golgi, vacuole | 32.89 | 26.36 |
| EES12269 | Sorghum | cytosol | 10.64 | 26.36 |
| CDY03441 | Canola | golgi | 29.28 | 26.36 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 28.95 | 26.19 |
| Bra019219.1-P | Field mustard | golgi | 28.95 | 26.09 |
| CDX92643 | Canola | golgi | 28.95 | 26.06 |
| CDY34291 | Canola | golgi | 29.06 | 25.98 |
| Bra013814.1-P | Field mustard | golgi | 29.06 | 25.98 |
| EER92723 | Sorghum | nucleus | 10.2 | 25.41 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 33.99 | 25.31 |
| Solyc04g076210.2.1 | Tomato | nucleus | 30.26 | 25.11 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 25.55 | 24.12 |
| EES07024 | Sorghum | mitochondrion | 10.2 | 22.2 |
| KXG20513 | Sorghum | golgi, plasma membrane | 22.7 | 21.21 |
| EES12962 | Sorghum | plastid | 12.06 | 19.47 |
| KXG22316 | Sorghum | plastid | 13.6 | 18.32 |
| OQU85579 | Sorghum | nucleus | 14.14 | 17.32 |
| EER89337 | Sorghum | nucleus | 15.57 | 15.49 |
| OQU92076 | Sorghum | nucleus | 12.94 | 13.63 |
| OQU90420 | Sorghum | mitochondrion | 10.86 | 13.43 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 1.1 | 12.82 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | UniProt:A0A1W0W5M9 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| GO:GO:0046872 | InterPro:IPR002893 | InterPro:IPR028889 | EnsemblPlants:OQU89635 | ProteinID:OQU89635 | ProteinID:OQU89635.1 |
| PFAM:PF00443 | PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | EnsemblPlantsGene:SORBI_3002G230400 | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix |
| UniParc:UPI0009DC8F95 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:62186125..62195818
Molecular Weight (calculated)
100406.0 Da
IEP (calculated)
7.923
GRAVY (calculated)
-0.493
Length
912 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVPKSVALV AALAFVVLGA LATRWLQRME ERNEEVRRLA LLAAAEVEAI EKEAAAYHYG QYGGFVRASD LPEVPSLWTT AQEVAAAPLW TTQAQEVAPV
101: LAPKEVEAEA AVAVSATAGK RVCAMCSKPT TLRCKRCKSA KYCTVKCQID HWRNGHKDEC HPLGQGATQD APENVMAGPS KESTNCQKCD DNKDVLYSQF
201: TGKAESVDCS KLSTSSNICK VHDSTICENC CLTAHDQHAG LEPEQSNKQA LGAENDEGLR NLPCIPAVDQ VPSTHSSAYC LPSNLLKGED NPPGPCARPE
301: NSGVMPNNSS KEKNYARQQT TSKAVRNYPT ESMLFSYKNF VELYSFNKLE LHPFGLYNLG NSCYANVVLQ CLAFTRPLTA YLLEGHHSQN CSKNEWCFMC
401: ELEKVLIEGK HGKSLVSPTG ILCHLNEIGV SFGHGAEEDA HEFLRYAIDK MQSASIKEAK KNGIQQLAEE TTLVHFIFGG YLRSKIKCTK CQVSSKQSER
501: ILDLTVEIDG DINTLDGALR RFTSSEVLDG DNRYHCSRCN SYERAQKKLT ILEAPNILTI ALKRYQSGVL GETSKVVKFP EHLNLSQYMS RTDDSSPVYT
601: LYAVVVHHNV SNATVSGHYV CYVKDSQGKW HEMDDNKVKP VSIQKVLSKC AYMLLYARIS PRAPTGARGA MLRQGASSHT KKPKQMTRSG SFPSGGGRYQ
701: SSRHQQGGLS KDDAVHDLTY ALGTSDRSSS YPVPPACFSR SNSSSLFSSS DVGSSCTFSS DNTDSTRKSC MEYGHIFGAS GYMCQVSPAV IPEEDKLSYL
801: RQRSSWNPSS SCHDMDEEVG KFARQYQRRY QYQAGRGPRV NSCGETTSFS YADQGKYQGS SSHNRTNFGS SSCKLTEERR STGPAFFLEG RLGRGLSKYF
901: YFTVQGGLGL GL
101: LAPKEVEAEA AVAVSATAGK RVCAMCSKPT TLRCKRCKSA KYCTVKCQID HWRNGHKDEC HPLGQGATQD APENVMAGPS KESTNCQKCD DNKDVLYSQF
201: TGKAESVDCS KLSTSSNICK VHDSTICENC CLTAHDQHAG LEPEQSNKQA LGAENDEGLR NLPCIPAVDQ VPSTHSSAYC LPSNLLKGED NPPGPCARPE
301: NSGVMPNNSS KEKNYARQQT TSKAVRNYPT ESMLFSYKNF VELYSFNKLE LHPFGLYNLG NSCYANVVLQ CLAFTRPLTA YLLEGHHSQN CSKNEWCFMC
401: ELEKVLIEGK HGKSLVSPTG ILCHLNEIGV SFGHGAEEDA HEFLRYAIDK MQSASIKEAK KNGIQQLAEE TTLVHFIFGG YLRSKIKCTK CQVSSKQSER
501: ILDLTVEIDG DINTLDGALR RFTSSEVLDG DNRYHCSRCN SYERAQKKLT ILEAPNILTI ALKRYQSGVL GETSKVVKFP EHLNLSQYMS RTDDSSPVYT
601: LYAVVVHHNV SNATVSGHYV CYVKDSQGKW HEMDDNKVKP VSIQKVLSKC AYMLLYARIS PRAPTGARGA MLRQGASSHT KKPKQMTRSG SFPSGGGRYQ
701: SSRHQQGGLS KDDAVHDLTY ALGTSDRSSS YPVPPACFSR SNSSSLFSSS DVGSSCTFSS DNTDSTRKSC MEYGHIFGAS GYMCQVSPAV IPEEDKLSYL
801: RQRSSWNPSS SCHDMDEEVG KFARQYQRRY QYQAGRGPRV NSCGETTSFS YADQGKYQGS SSHNRTNFGS SSCKLTEERR STGPAFFLEG RLGRGLSKYF
901: YFTVQGGLGL GL
001: MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR PATVDYGGDS VSDVYRCAVC LYPTTTRCSQ CKSVRYCSSK CQILHWRRGH KEECRSPDYD
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D
Arabidopsis Description
UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.