CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045104_P005	Maize	nucleus	83.97	85.27
Os06t0184300-01	Rice	mitochondrion	63.03	62.55
HORVU7Hr1G030300.1	Barley	nucleus	63.25	62.37
TraesCS7A01G147900.1	Wheat	nucleus	62.49	62.22
TraesCS7B01G051400.2	Wheat	nucleus	63.58	62.09
TraesCS7D01G149800.1	Wheat	nucleus	63.36	62.01
KRH72298	Soybean	cytosol, plastid	27.7	50.0
GSMUA_Achr3P04660_001	Banana	nucleus	31.62	48.33
CDY02782	Canola	nucleus	33.59	38.45
CDX88651	Canola	nucleus, plastid	34.35	38.23
CDY11838	Canola	nucleus, plastid	34.13	38.22
Bra006790.1-P	Field mustard	nucleus, plastid	34.35	37.91
CDY32735	Canola	nucleus	32.93	37.7
CDY57464	Canola	nucleus	34.79	37.62
CDY55010	Canola	nucleus	34.57	37.29
KRH03060	Soybean	nucleus	36.64	37.21
GSMUA_Achr4P01920_001	Banana	nucleus	39.15	37.16
VIT_19s0014g00210.t01	Wine grape	nucleus	35.66	36.58
Bra020400.1-P	Field mustard	nucleus	33.15	36.49
Solyc07g005530.2.1	Tomato	nucleus	36.64	36.4
PGSC0003DMT400028924	Potato	nucleus	36.64	36.29
AT5G57990.1	Thale cress	nucleus	33.91	36.2
VIT_00s0174g00260.t01	Wine grape	nucleus	38.93	35.81
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	30.86	33.33
Bra002683.1-P	Field mustard	nucleus	35.11	32.79
EER92723	Sorghum	nucleus	11.34	28.42
EES12269	Sorghum	cytosol	11.01	27.45
EES07024	Sorghum	mitochondrion	11.23	24.58
OQU85579	Sorghum	nucleus	17.56	21.61
KXG22316	Sorghum	plastid	15.49	20.97
EES12962	Sorghum	plastid	12.0	19.47
OQU81355	Sorghum	cytosol, nucleus, plastid	1.53	17.95
OQU92076	Sorghum	nucleus	16.58	17.55
OQU80649	Sorghum	nucleus	15.38	17.49
KXG20513	Sorghum	golgi, plasma membrane	16.58	15.57
OQU89635	Sorghum	vacuole	15.49	15.57
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	15.49	14.7
OQU90420	Sorghum	mitochondrion	11.23	13.98

Protein Annotations

MapMan:19.2.3.1.1.9	Gene3D:3.90.70.10	EntrezGene:8065417	UniProt:C5Z5I7	EnsemblPlants:EER89337	ProteinID:EER89337
ProteinID:EER89337.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235
PANTHER:PTHR44033	PANTHER:PTHR44033:SF1	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	EnsemblPlantsGene:SORBI_3010G065800	SUPFAM:SSF54001
unigene:Sbi.9566	UniParc:UPI0001A89731	InterPro:USP_CS	InterPro:USP_dom	RefSeq:XP_002437970.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:5218065..5225838

Molecular Weight (calculated)

99378.6 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.539

Length

917 amino acids

Sequence
(BLAST)

001: MAEVSTAAAP EGVLHRRIEF HPARRPHASV AVGGGGFRME TLNPDAAGKA GAGAAVGSSE GEATRSEKAD AGGIDPELSV ARIYLGRIGA GLENLGNTCY
101: LNSVLQCLTY TEPFAAYLQS GKHKSSCRAS GFCALCALQN HVKTALESTG KIVTPFRIVK NLRCISRTFR NSRQEDAHEL MVNLLESMHK CCLPSGVPSE
201: SQSAYDKSLV HKIFGGRLRS QVKCTRCSHC SNKFDPFLDL SLDIAKATTL VRALENFTED ELLDGGQKQY QCERCRQKVV AKKRFTIDKA PNVLTIHLKR
301: FSPFNPREKI DKKVDFQPSL DLKPFVSDSK GTDFKYSLYG VLVHTGWNTQ SGHYYCFVRT SSGMWHNLDD NKVRQVREAD VLKQKAYMLF YVRNSIGKSV
401: AHKENITANL PMKKTPEKIS SLNGITQSSV KAQNLNGVSR FGDKAHNTII GYSTIFSKTT TGHCSKNEVK AEDAPASQNN ALPSRQAPGT QNDGGTLRTK
501: PMQFDVNSQE TASSHQPAPF TNTCGEQTVV GKPSQEMEPK AGAGKDTSVV SAIANGAATL SKADKLTSQP QTTPFSEVAP HVNGTAAEFA ARSLSKKDSV
601: VSNGVVPGIG CLTSSEKARN FPESVDQANE ISKALPMSQN NIAPVIAQAD CGVEISSGGI MQVAVAASCN GTTAKKVNVK SSKKLVRYPV VNMWLGSRQL
701: LFTSRKPGKK AKHKRSRTVR RVVGCKDAAN VSCLNEQLTS TSATARSETV ECTSSRQKRS HASARSKDDT QSSKNKQKVD GASVGAGTSA PSSSADIPKS
801: DPSSSIGAKL VAAQPVSIRA TDLMEATVPC WDDVDVPNTK VAAGQHSKRK SIGYILDEWD EEYDKGKTKK VRKSKQDFGG PNPFQEEADY ISERRMKQKS
901: YQGKSWNKPN TIEELRI

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.