Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028005_P001 | Maize | nucleus | 98.36 | 98.36 |
| Os03t0190800-01 | Rice | cytosol | 91.26 | 91.26 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 89.89 | 89.89 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 89.34 | 89.34 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 89.34 | 89.34 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 89.07 | 89.07 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 88.8 | 88.8 |
| GSMUA_Achr10P... | Banana | cytosol | 81.97 | 86.96 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 84.43 | 83.74 |
| KRH31299 | Soybean | nucleus | 84.15 | 83.47 |
| KRH59329 | Soybean | nucleus | 84.15 | 83.47 |
| KRH43175 | Soybean | nucleus | 83.88 | 83.2 |
| KRG97572 | Soybean | nucleus | 83.33 | 82.66 |
| CDY13770 | Canola | nucleus | 80.33 | 82.58 |
| Bra038533.1-P | Field mustard | nucleus | 79.78 | 82.25 |
| PGSC0003DMT400032703 | Potato | nucleus | 82.24 | 82.24 |
| AT2G22310.1 | Thale cress | nucleus | 81.42 | 81.64 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 81.15 | 81.15 |
| CDX76934 | Canola | nucleus | 78.42 | 81.07 |
| AT4G39910.1 | Thale cress | nucleus | 81.97 | 80.86 |
| CDY68864 | Canola | nucleus | 81.69 | 80.38 |
| Bra010647.1-P | Field mustard | nucleus | 81.69 | 80.38 |
| EES12269 | Sorghum | cytosol | 80.33 | 79.89 |
| CDX69375 | Canola | nucleus | 80.87 | 79.78 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 66.39 | 79.67 |
| GSMUA_Achr10P... | Banana | nucleus | 78.69 | 77.01 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 72.68 | 74.3 |
| CDY63898 | Canola | nucleus | 80.6 | 74.12 |
| Bra011823.1-P | Field mustard | nucleus | 80.05 | 66.44 |
| EES07024 | Sorghum | mitochondrion | 71.58 | 62.53 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 81.69 | 61.4 |
| EES12962 | Sorghum | plastid | 26.78 | 17.35 |
| KXG22316 | Sorghum | plastid | 25.14 | 13.59 |
| OQU85579 | Sorghum | nucleus | 26.23 | 12.89 |
| OQU80649 | Sorghum | nucleus | 27.05 | 12.28 |
| OQU90420 | Sorghum | mitochondrion | 24.59 | 12.21 |
| EER89337 | Sorghum | nucleus | 28.42 | 11.34 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 27.87 | 10.56 |
| OQU92076 | Sorghum | nucleus | 24.86 | 10.51 |
| KXG20513 | Sorghum | golgi, plasma membrane | 27.32 | 10.25 |
| OQU89635 | Sorghum | vacuole | 25.41 | 10.2 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 1.64 | 7.69 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | EntrezGene:8081912 | UniProt:C5WUT7 | EnsemblPlants:EER92723 | ProteinID:EER92723 |
| ProteinID:EER92723.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR43942 | PANTHER:PTHR43942:SF8 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | EnsemblPlantsGene:SORBI_3001G475300 | SUPFAM:SSF54001 |
| unigene:Sbi.2056 | UniParc:UPI0001A829C6 | InterPro:USP_CS | InterPro:USP_dom | RefSeq:XP_002465725.1 | : |
Description
hypothetical protein
Coordinates
chr1:+:74760829..74766282
Molecular Weight (calculated)
42229.0 Da
IEP (calculated)
5.974
GRAVY (calculated)
-0.478
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAGSRLEK ALGEQFPEGE RYFGLENFGN TCYCNSVLQA LYFCVPFRDQ LLEYYANNKN TGDVEENMLT CLADLFSQIS NQKKKTGVIA PKRFIQRLKK
101: QNEIFRSYMH QDAHEFLNFL LNELVDILEK EHNAAREPLQ NLPFQKNSNG TIDGQPNGSH KELAATWVHK CFQGILTNET RCLRCETVTD RDETFFDLSL
201: DIEQNSSLTS CLKNFSSTET LNAEDKFFCD KCCSLQEAQK RMKIKKPPNI LVIHLKRFKY IEQLQRYKKL SYRVVFPLEL KLLNTVDNSD LEYSLFAVVV
301: HVGSGPNHGH YISLVKSHNH WLFFDDENVE MTDESMVQAF FGSPQEFSGN TDNGYILFYE SLAERS
101: QNEIFRSYMH QDAHEFLNFL LNELVDILEK EHNAAREPLQ NLPFQKNSNG TIDGQPNGSH KELAATWVHK CFQGILTNET RCLRCETVTD RDETFFDLSL
201: DIEQNSSLTS CLKNFSSTET LNAEDKFFCD KCCSLQEAQK RMKIKKPPNI LVIHLKRFKY IEQLQRYKKL SYRVVFPLEL KLLNTVDNSD LEYSLFAVVV
301: HVGSGPNHGH YISLVKSHNH WLFFDDENVE MTDESMVQAF FGSPQEFSGN TDNGYILFYE SLAERS
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
Arabidopsis Description
UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.