Factsheet for Os03t0190800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028005_P001	Maize	nucleus	91.53	91.53
HORVU4Hr1G078590.1	Barley	cytosol	91.53	91.53
EER92723	Sorghum	nucleus	91.26	91.26
TraesCS4B01G306100.1	Wheat	cytosol	90.98	90.98
TraesCS4D01G304300.1	Wheat	cytosol	90.71	90.71
TraesCS4A01G406600.1	Wheat	cytosol	90.71	90.71
TraesCS7D01G125700.1	Wheat	nucleus	90.44	90.44
GSMUA_Achr10P...	Banana	cytosol	82.24	87.25
KRH31299	Soybean	nucleus	84.97	84.28
VIT_07s0141g00230.t01	Wine grape	nucleus	84.7	84.01
PGSC0003DMT400032703	Potato	nucleus	83.61	83.61
KRH59329	Soybean	nucleus	84.15	83.47
KRG97572	Soybean	nucleus	84.15	83.47
KRH43175	Soybean	nucleus	83.88	83.2
CDY13770	Canola	nucleus	80.33	82.58
Bra038533.1-P	Field mustard	nucleus	79.78	82.25
Os04t0452400-01	Rice	nucleus	81.97	81.74
AT4G39910.1	Thale cress	nucleus	82.79	81.67
AT2G22310.1	Thale cress	nucleus	81.42	81.64
CDY68864	Canola	nucleus	82.79	81.45
Bra010647.1-P	Field mustard	nucleus	82.79	81.45
GSMUA_Achr8P14390_001	Banana	cytosol	81.42	81.42
CDX69375	Canola	nucleus	82.24	81.13
CDX76934	Canola	nucleus	78.42	81.07
GSMUA_Achr7P19160_001	Banana	mitochondrion	67.21	80.66
GSMUA_Achr10P...	Banana	nucleus	79.23	77.54
VIT_09s0070g00500.t01	Wine grape	golgi, mitochondrion, nucleus, peroxisome	73.77	75.42
CDY63898	Canola	nucleus	81.97	75.38
Bra011823.1-P	Field mustard	nucleus	81.42	67.57
CDY68683	Canola	endoplasmic reticulum, vacuole	82.79	62.22
Os02t0573400-01	Rice	nucleus	68.85	60.72
Os07t0661300-01	Rice	cytosol, plasma membrane	25.96	19.43
Os04t0647300-01	Rice	nucleus	27.32	16.92
Os05t0510300-01	Rice	plastid	24.86	14.13
Os06t0184300-01	Rice	mitochondrion	27.05	10.71
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	28.42	10.67
Os06t0654000-01	Rice	cytosol, nucleus	27.32	10.59
Os08t0478500-01	Rice	plastid	27.05	10.12
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	24.86	9.81
Os02t0795000-01	Rice	nucleus	27.6	8.52

Protein Annotations

MapMan:19.2.3.1.1.2	Gene3D:3.90.70.10	EntrezGene:4331901	ProteinID:AAN64154.1	ProteinID:ABF94396.1	EMBL:AK069100
ProteinID:BAF11142.1	ProteinID:BAS82715.1	MEROPS:C19.008	ProteinID:EAZ25886.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
InterPro:IPR028889	EnsemblPlantsGene:Os03g0190800	EnsemblPlants:Os03t0190800-01	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR43942	PANTHER:PTHR43942:SF8	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	UniProt:Q8H7M6
SUPFAM:SSF54001	UniParc:UPI00000AD2D7	InterPro:USP_CS	InterPro:USP_dom	RefSeq:XP_015632207.1	:

Description

Similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin- specific processing protease 3) (AtUBP3). (Os03t0190800-01)

Coordinates

chr3:-:4715169..4719205

Molecular Weight (calculated)

42030.0 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.414

Length

366 amino acids

Sequence
(BLAST)

001: MGAASSRLEK ALGEQFPEGE RYFGLENFGN TCYCNSVLQA LYFCVPFREQ LLEYYANNKS TGDVEDNMLT CLADLFSQIS NQKKKTGVIA PKRFIQRLKK
101: QNEIFRSYMH QDAHEFLNFL LNELVDILEK ESKVVAEPCE NSSLKKNSNG PINVQLNGTK KEPVPTLVHK CFQGILTNET RCLRCETVTD RDETFFDLSL
201: DIEQNSSITS CLKNFSSTET LNAEDKFFCD KCCSLQEAQK RMKIKKPPNI LVIHLKRFKY IEQLGRYKKL SYRVVFPLEL KLINTVDNSD LEYSLFAVLV
301: HVGSGPNHGH YISLVKSHNH WLFFDDENVE MTDESMVQTF FGSAQEFSGN TDNGYILFYE SLAEKS

Best Arabidopsis Sequence Match ( AT4G39910.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K

Arabidopsis Description

UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.