Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038533.1-P | Field mustard | nucleus | 98.31 | 98.59 |
| CDX76934 | Canola | nucleus | 96.07 | 96.61 |
| AT2G22310.1 | Thale cress | nucleus | 90.45 | 88.22 |
| KRH59329 | Soybean | nucleus | 90.73 | 87.53 |
| KRH43175 | Soybean | nucleus | 90.45 | 87.26 |
| GSMUA_Achr10P... | Banana | cytosol | 84.27 | 86.96 |
| CDX69375 | Canola | nucleus | 90.17 | 86.52 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 89.33 | 86.18 |
| CDY68864 | Canola | nucleus | 89.89 | 86.02 |
| KRH31299 | Soybean | nucleus | 88.76 | 85.64 |
| KRG97572 | Soybean | nucleus | 88.76 | 85.64 |
| PGSC0003DMT400032703 | Potato | nucleus | 84.83 | 82.51 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 69.66 | 81.31 |
| Zm00001d028005_P001 | Maize | nucleus | 83.43 | 81.15 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 83.43 | 81.15 |
| EER92723 | Sorghum | nucleus | 82.58 | 80.33 |
| Os03t0190800-01 | Rice | cytosol | 82.58 | 80.33 |
| CDY63898 | Canola | nucleus | 89.61 | 80.15 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 82.3 | 80.05 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 82.3 | 80.05 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 82.3 | 80.05 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 82.02 | 79.78 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 81.74 | 79.51 |
| GSMUA_Achr10P... | Banana | nucleus | 81.74 | 77.81 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 77.53 | 77.09 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 89.89 | 65.71 |
| CDY50263 | Canola | cytosol | 46.63 | 61.25 |
| CDX72275 | Canola | cytosol | 24.72 | 23.78 |
| CDY23262 | Canola | nucleus | 25.56 | 16.64 |
| CDY36465 | Canola | cytosol | 26.12 | 15.84 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 26.12 | 15.76 |
| CDX75188 | Canola | vacuole | 26.97 | 15.71 |
| CDX68773 | Canola | nucleus, plasma membrane | 26.97 | 15.64 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 25.84 | 15.41 |
| CDX87681 | Canola | nucleus | 26.97 | 15.24 |
| CDX76553 | Canola | cytosol | 26.97 | 14.95 |
| CDX85744 | Canola | cytosol | 24.16 | 14.78 |
| CDY40119 | Canola | nucleus | 24.16 | 14.73 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.12 | 14.69 |
| CDY20330 | Canola | vacuole | 25.84 | 14.31 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.12 | 14.29 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 25.84 | 14.29 |
| CDY37145 | Canola | cytosol | 26.69 | 14.26 |
| CDY58499 | Canola | endoplasmic reticulum | 28.37 | 14.01 |
| CDX75770 | Canola | mitochondrion, nucleus | 25.84 | 13.86 |
| CDX77686 | Canola | endoplasmic reticulum | 28.09 | 13.24 |
| CDY08792 | Canola | vacuole | 27.53 | 13.08 |
| CDX98449 | Canola | mitochondrion | 25.84 | 13.07 |
| CDX97571 | Canola | mitochondrion | 25.84 | 12.99 |
| CDY14564 | Canola | golgi | 27.53 | 12.86 |
| CDY11838 | Canola | nucleus, plastid | 26.97 | 11.72 |
| CDX88651 | Canola | nucleus, plastid | 26.97 | 11.65 |
| CDX96790 | Canola | nucleus | 26.97 | 11.5 |
| CDY55010 | Canola | nucleus | 27.25 | 11.41 |
| CDY32735 | Canola | nucleus | 25.56 | 11.36 |
| CDX83925 | Canola | nucleus | 26.97 | 11.33 |
| CDY57464 | Canola | nucleus | 26.97 | 11.32 |
| CDY02782 | Canola | nucleus | 25.28 | 11.24 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.53 | 11.19 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.25 | 11.06 |
| CDY11021 | Canola | golgi | 26.97 | 9.51 |
| CDX92643 | Canola | golgi | 26.97 | 9.48 |
| CDY03441 | Canola | golgi | 26.4 | 9.28 |
| CDY34291 | Canola | golgi | 26.4 | 9.22 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | GO:A0A078FH65 | UniProt:A0A078FH65 | EnsemblPlants:CDY13770 | ProteinID:CDY13770 |
| ProteinID:CDY13770.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00078203001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF5 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| UniParc:UPI0004EE815C | InterPro:USP_CS | InterPro:USP_dom | : | : | : |
Description
BnaA09g42720DBnaA09g42720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH65]
Coordinates
chrLK032038:+:253905..255650
Molecular Weight (calculated)
41168.7 Da
IEP (calculated)
6.055
GRAVY (calculated)
-0.458
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAGSKLEK ALGEQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEYYSTNNK SCEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN
101: VLFRSYMHQD AHEFLNYLLN ELDDILEKEA KTDNETSSNG PKLLQENGVH KEPTVTWVHK TFQGILTNET RCLRCETVTA RDETFLDLSL DIEQNSSITS
201: CLNNFCSTET LHSEDKFFCD KCCSLQEAQK RMKIKKPPHI LVIHLKRFKY IEQLGRYKKL SYRVVFPLEL KLDNTVEEYA DIEYSLFAVV VHVGTGPNHG
301: HYVSLVKSHN HWLFFDDENV EMIEESAVQT FFGSSQEYSS NTDHGYILFY ESLGTR
101: VLFRSYMHQD AHEFLNYLLN ELDDILEKEA KTDNETSSNG PKLLQENGVH KEPTVTWVHK TFQGILTNET RCLRCETVTA RDETFLDLSL DIEQNSSITS
201: CLNNFCSTET LHSEDKFFCD KCCSLQEAQK RMKIKKPPHI LVIHLKRFKY IEQLGRYKKL SYRVVFPLEL KLDNTVEEYA DIEYSLFAVV VHVGTGPNHG
301: HYVSLVKSHN HWLFFDDENV EMIEESAVQT FFGSSQEYSS NTDHGYILFY ESLGTR
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEHYANNKA DAEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN
101: ELFRSYMHQD AHEFLNYLLN ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR CLRCETVTAR DETFLDLSLD
201: IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV
301: HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE SLGTR
101: ELFRSYMHQD AHEFLNYLLN ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR CLRCETVTAR DETFLDLSLD
201: IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV
301: HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE SLGTR
Arabidopsis Description
UBP4UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.