Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83925 | Canola | nucleus | 94.97 | 93.62 |
| Bra016618.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 96.89 | 90.7 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 85.87 | 81.76 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 84.19 | 80.25 |
| AT1G17110.2 | Thale cress | endoplasmic reticulum, plasma membrane | 84.55 | 76.08 |
| VIT_19s0140g00200.t01 | Wine grape | plasma membrane | 51.98 | 43.53 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 43.23 | 43.08 |
| KRH13569 | Soybean | endoplasmic reticulum, plasma membrane | 50.9 | 42.97 |
| KRH21804 | Soybean | endoplasmic reticulum, plasma membrane | 50.9 | 42.93 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 49.46 | 42.75 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 42.75 | 38.55 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 43.47 | 37.58 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 42.28 | 37.51 |
| Os02t0244300-01 | Rice | endoplasmic reticulum, plasma membrane | 43.59 | 37.33 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 43.59 | 37.26 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 43.23 | 37.22 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 43.47 | 37.04 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 43.47 | 36.89 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 43.35 | 35.98 |
| CDX75188 | Canola | vacuole | 25.75 | 35.19 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.59 | 35.07 |
| CDY20330 | Canola | vacuole | 26.83 | 34.84 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.83 | 34.78 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.83 | 34.41 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.27 | 34.36 |
| CDY08792 | Canola | vacuole | 26.83 | 29.91 |
| CDY14564 | Canola | golgi | 27.07 | 29.66 |
| CDY13770 | Canola | nucleus | 11.5 | 26.97 |
| CDY68864 | Canola | nucleus | 11.86 | 26.61 |
| CDX69375 | Canola | nucleus | 11.74 | 26.42 |
| CDX76934 | Canola | nucleus | 11.14 | 26.27 |
| CDX72275 | Canola | cytosol | 11.38 | 25.68 |
| CDY63898 | Canola | nucleus | 11.74 | 24.62 |
| CDX92643 | Canola | golgi | 28.98 | 23.89 |
| CDY11021 | Canola | golgi | 28.86 | 23.89 |
| CDY34291 | Canola | golgi | 28.14 | 23.04 |
| CDY03441 | Canola | golgi | 27.78 | 22.9 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 11.86 | 20.33 |
| CDX75770 | Canola | mitochondrion, nucleus | 15.33 | 19.28 |
| CDX97571 | Canola | mitochondrion | 15.69 | 18.5 |
| CDX98449 | Canola | mitochondrion | 15.57 | 18.47 |
| CDX87681 | Canola | nucleus | 13.89 | 18.41 |
| CDX76553 | Canola | cytosol | 14.01 | 18.22 |
| CDX85744 | Canola | cytosol | 12.69 | 18.21 |
| CDY40119 | Canola | nucleus | 12.57 | 17.98 |
| CDY23262 | Canola | nucleus | 11.74 | 17.92 |
| CDY50263 | Canola | cytosol | 5.63 | 17.34 |
| CDY11838 | Canola | nucleus, plastid | 16.89 | 17.22 |
| CDX88651 | Canola | nucleus, plastid | 16.89 | 17.11 |
| CDY36465 | Canola | cytosol | 11.86 | 16.87 |
| CDY37145 | Canola | cytosol | 13.41 | 16.82 |
| CDY57464 | Canola | nucleus | 16.53 | 16.27 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 11.38 | 16.1 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 11.5 | 16.08 |
| CDY55010 | Canola | nucleus | 16.17 | 15.88 |
| CDY02782 | Canola | nucleus | 14.97 | 15.61 |
| CDY32735 | Canola | nucleus | 14.85 | 15.48 |
| CDY58499 | Canola | endoplasmic reticulum | 13.29 | 15.4 |
| CDX77686 | Canola | endoplasmic reticulum | 13.89 | 15.36 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078E456 | EnsemblPlants:CDX96790 | ProteinID:CDX96790 |
| ProteinID:CDX96790.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00103022001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF144232 | SUPFAM:SSF54001 | UniParc:UPI0004EF1904 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g23330D
Coordinates
chrLK031895:+:982535..986411
Molecular Weight (calculated)
93349.3 Da
IEP (calculated)
7.852
GRAVY (calculated)
-0.544
Length
835 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEAFIAE TEVNVNRGVR FEAAATENRG LRTKTKAAVS AASGAVRDDF VSGVSGTVAE QRYESVAATC GVPVSNEFHV CARCFSPAKT RCSRCKSVRY
101: CSGQCQIIHW RLAHKDECIP VEACSSSSER ASFENESVLH DQDMDATMYS NGTKQKAKGK TSKSSVEFES LGISTPQVNT PGRKSVGKPN SSKSNRESFS
201: GEAACAGGEY KKGQTKHKSR STIGAAVETN SRRHSVDNSC MQMNGQAFVS GMQETCESNL GARGSFGCPN AQYPSNGTRT ATLRKSGEQP CTETSKKGLV
301: PAVSKTVRSK DTCIAEESNG ISSTMGLMKM MGLRNSTKHG DRHQNLRSMS LIFQMIFPYE EFVKFFQCEV FYLSPRGLVN CGNSCYANAV LQSLTCTKPL
401: VAYLLQRSHS RSCSGKDWCL MCELEQHVMM LRESGGPLSA SRILSQMRSI NCQIGDGSQE DAHEFLRLLV ASMQSICLER LGGETKVDPR LQETTLVQHM
501: FGGRLRSKVK CLRCGHESER YENIMDLTLE IYGWVESLQD ALTQFTRPED LDGENMYRCS RCAGYVKARK ELSIHEAPNI LTIVLKRFQE GRYGKINKCI
601: SFPEMLDMIP FMTRTGDVPP LYMLYAVIVH LDTLNASFSG HYISYVKDLR GNWFRIDDSE IHQVPMTQVM SEGAYMLFYM RSYPRPLRGE PNGKAQVRHS
701: LSQPRDEMKE QRKPVNRFKP RADHHKNLES SSEWSLFTSS DEASFTTEST RDSFSTVDYT DGCNVLDSSS PFSIFNNLRH NVEPSPHNTV ACRMFSGTKS
801: ETRYFVEEET NHNNTVVMDS APTSHDQTYS YEQNW
101: CSGQCQIIHW RLAHKDECIP VEACSSSSER ASFENESVLH DQDMDATMYS NGTKQKAKGK TSKSSVEFES LGISTPQVNT PGRKSVGKPN SSKSNRESFS
201: GEAACAGGEY KKGQTKHKSR STIGAAVETN SRRHSVDNSC MQMNGQAFVS GMQETCESNL GARGSFGCPN AQYPSNGTRT ATLRKSGEQP CTETSKKGLV
301: PAVSKTVRSK DTCIAEESNG ISSTMGLMKM MGLRNSTKHG DRHQNLRSMS LIFQMIFPYE EFVKFFQCEV FYLSPRGLVN CGNSCYANAV LQSLTCTKPL
401: VAYLLQRSHS RSCSGKDWCL MCELEQHVMM LRESGGPLSA SRILSQMRSI NCQIGDGSQE DAHEFLRLLV ASMQSICLER LGGETKVDPR LQETTLVQHM
501: FGGRLRSKVK CLRCGHESER YENIMDLTLE IYGWVESLQD ALTQFTRPED LDGENMYRCS RCAGYVKARK ELSIHEAPNI LTIVLKRFQE GRYGKINKCI
601: SFPEMLDMIP FMTRTGDVPP LYMLYAVIVH LDTLNASFSG HYISYVKDLR GNWFRIDDSE IHQVPMTQVM SEGAYMLFYM RSYPRPLRGE PNGKAQVRHS
701: LSQPRDEMKE QRKPVNRFKP RADHHKNLES SSEWSLFTSS DEASFTTEST RDSFSTVDYT DGCNVLDSSS PFSIFNNLRH NVEPSPHNTV ACRMFSGTKS
801: ETRYFVEEET NHNNTVVMDS APTSHDQTYS YEQNW
001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
Arabidopsis Description
UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.