CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05289	Soybean	nucleus	93.68	93.51
VIT_04s0008g06860.t01	Wine grape	nucleus	65.7	65.82
PGSC0003DMT400038315	Potato	nucleus	52.89	65.4
Solyc08g068810.2.1	Tomato	cytosol	61.73	62.3
PGSC0003DMT400086994	Potato	cytosol	14.44	60.15
GSMUA_Achr7P05330_001	Banana	cytosol	33.94	58.93
Bra028566.1-P	Field mustard	cytosol	49.28	54.17
AT5G10790.1	Thale cress	cytosol	54.15	53.86
CDX85744	Canola	cytosol	52.17	49.66
CDY40119	Canola	nucleus	51.81	49.14
KRH20191	Soybean	plastid	52.17	48.65
KRH03615	Soybean	cytosol	51.81	48.48
KRG97572	Soybean	nucleus	16.61	24.93
KRH59329	Soybean	nucleus	16.25	24.39
KRH31299	Soybean	nucleus	16.25	24.39
KRH43175	Soybean	nucleus	16.25	24.39
KRH72298	Soybean	cytosol, plastid	19.68	21.46
KRH39864	Soybean	cytosol	15.88	16.54
KRH23933	Soybean	cytosol	15.7	16.08
KRH43852	Soybean	nucleus	16.97	14.66
KRH13611	Soybean	nucleus	16.97	14.42
KRH52289	Soybean	golgi	18.95	14.31
KRH61621	Soybean	golgi	18.59	13.88
KRH15706	Soybean	golgi, plasma membrane, vacuole	17.69	13.44
KRH74417	Soybean	nucleus	17.33	13.28
KRH05330	Soybean	golgi, plasma membrane	17.51	13.16
KRH39541	Soybean	nucleus	17.15	12.86
KRH03060	Soybean	nucleus	19.68	12.07
KRH74502	Soybean	golgi, plasma membrane, vacuole	20.04	11.97
KRH69660	Soybean	golgi	20.22	11.94
KRH52893	Soybean	extracellular, golgi, vacuole	18.95	11.82
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	20.4	11.43
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	20.4	11.41
KRH16837	Soybean	golgi	21.3	11.29
KRH72452	Soybean	golgi, plasma membrane	20.94	11.2
KRH62182	Soybean	golgi, vacuole	21.66	10.54

Protein Annotations

EntrezGene:100806347	MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	EMBL:ACUP02008643
MEROPS:C19.A11	EnsemblPlantsGene:GLYMA_14G109000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234
GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	UniProt:I1M9E2	InterPro:IPR001607	InterPro:IPR013083	InterPro:IPR028889
EnsemblPlants:KRH15753	ProteinID:KRH15753	ProteinID:KRH15753.1	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972
PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	SUPFAM:SSF57850	UniParc:UPI000233BC8C	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_UBP	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:12020173..12024201

Molecular Weight (calculated)

62494.8 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.331

Length

554 amino acids

Sequence
(BLAST)

001: MLPRNPSYTN PEPCQHLAEY KLKHGFNGYK AIQKLLVTSP IGKTSVKKPN TKVPRCGFCN GCEGRFYLCL ICSSFSCLDH TLLHPQSESG HAVFVDIERT
101: ELYCGVCRDQ LYDPDFDQVV MSKHSMGVAG GATGNESIGQ RLIKRRRLVS GIVGLDLQKS KCRVSTKDLR GKSCYPLGLR GLNNLGSTCY MNSVLQVLLH
201: APPFRDYFLS GGQRLEACHH RRATDLMCCL LCDVNAIFSA VYSGDRSPYS PAQFLYSWWQ HSANLACYEQ QDAHEFFISM LDAIHEKEGK TRNGSKGNGD
301: CQCIAHKVFY GLLRSDVTCM ACGFTSTTYD PCVDISLNLD TDVSSTEKGK KLTKQNEDGS MSTLSGCLDL FTRPEKLGSD QKLYCQNCRE RQDSLKQMSI
401: RKLPLVLSLH VKRFEHSFVK KCSRKIDRYL HFPFSLDMTP YLSSSILRAR YGNRNFTFGG DQSDMFSEFE IFAVVTHSGT LESGHYVSFV RVRNQWYRCN
501: DAWITVVDEA TVRASQCYMI FYVQKTLHNK ANEDLSHVPN SPGRDLFLPI AGCC

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.