Factsheet for TraesCS2B01G544700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G516100.1	Wheat	mitochondrion	97.57	97.57
TraesCS2D01G517600.1	Wheat	mitochondrion	97.3	97.3
Solyc07g007640.1.1	Tomato	cytosol	41.62	64.98
HORVU2Hr1G114330.1	Barley	cytosol	95.68	63.21
VIT_11s0118g00280.t01	Wine grape	mitochondrion	47.03	61.48
EES12962	Sorghum	plastid	87.84	57.52
Zm00001d002086_P001	Maize	plastid	86.22	56.66
Os04t0647300-01	Rice	nucleus	88.11	55.16
KRH03615	Soybean	cytosol	67.03	41.89
KRH20191	Soybean	plastid	67.03	41.75
GSMUA_Achr7P17050_001	Banana	plastid	58.38	41.38
VIT_11s0118g00290.t01	Wine grape	nucleus	23.24	24.43
TraesCS4B01G306100.1	Wheat	cytosol	23.51	23.77
TraesCS6B01G223900.1	Wheat	plastid	24.05	21.24
TraesCS2B01G408400.1	Wheat	cytosol	20.27	17.4
TraesCS1B01G342600.2	Wheat	plastid	23.78	13.62
TraesCS3B01G442400.1	Wheat	cytosol	22.16	13.18
TraesCS6B01G291800.1	Wheat	nucleus	23.78	11.91
TraesCS5B01G243400.1	Wheat	vacuole	25.68	10.37
TraesCS7B01G051400.2	Wheat	nucleus	25.95	10.22
TraesCS2B01G149000.2	Wheat	cytosol	20.81	9.99
TraesCS1B01G207800.1	Wheat	cytosol, nucleus, plastid	22.16	9.53
TraesCS6B01G231700.4	Wheat	plasma membrane	24.59	9.25
TraesCS7B01G179000.2	Wheat	plastid	24.32	9.06
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	25.95	8.93
TraesCS6B01G389500.1	Wheat	nucleus	24.32	8.42

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	PFscan:PS50235	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	EnsemblPlantsGene:TraesCS2B01G544700	EnsemblPlants:TraesCS2B01G544700.1	InterPro:USP_dom

Description

No Description!

Coordinates

chr2B:+:741854830..741857296

Molecular Weight (calculated)

42775.5 Da

IEP (calculated)

7.525

GRAVY (calculated)

-0.523

Length

370 amino acids

Sequence
(BLAST)

001: MNSVLQALLH APPLRNYFLG DRHNRFLCPR RTPMRHRTTD AEVKAACLAC DLDEIYSATF SGERTPYSPA KFLYSWWQHA TNLASYEQQD AHEFFISILD
101: HIHENIKDDQ HKSHEQGDGD CCIAHRVFSG ILRSDVTCTN CGFSSTTFEP CMDISLDLDS GHNNYLGVAN PKPHVRNGER NVAGMSSKVS TLMRCLERFT
201: RAERLDADQK YFCERCKERQ ESLKQMSIRR LPLVSCFHIK RFEHSTVKKM SRKVDHSLQF PFSLDMTPYL SSSILRSRYG NRIFPSEACD PDAVSELPSE
301: FEIFAVITHS GKLDAGHYVT YLRLNNQWYR CDDAWVTRVD EHTVRSSQAY MLFYVQKTLY YKACERAAAE

Best Arabidopsis Sequence Match ( AT5G10790.2 )
(BLAST)

001: MSVKSGADVV AVRSNKKRRL DSQLIIGSNF LVSPRDRREK WTFPLGLRGL NNLGSTCFMN AVLQALVHAP PLRNFWLSGQ HNRDLCPRRT MGLLCLPCDL
101: DVIFSAMFSG DRTPYSPAHL LYSWWQHSTN LATYEQQDSH EFFISLLDRI HENEGKSKCL YQDNEECQCI THKAFSGLLR SDVTCTTCGS TSTTYDPFID
201: ISLTLDSMNG FSPADCRKNR YSGGPSVNAI MPTLSGCLDF FTRSEKLGPD QKLNCQSCGE KRESSKQMSI RRLPLLLCLH VKRFEHSLTR KTSRKIDSYL
301: QYPFRLNMSP YLSSSIIGKR FGNRIFAFDG EGEYDSSSSS SPSAEFEIFA VVTHKGMLES GHYVTYLRLK GLWYRCDDAW INEVEEEVVR GCECYMLFYA
401: QETVIQKAHK ELSYQVISMA DAFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.