Factsheet for PGSC0003DMT400074057

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012241
PGSC0003DMT400012242
PGSC0003DMT400012244
PGSC0003DMT400012245
PGSC0003DMT400016372
PGSC0003DMT400020100
PGSC0003DMT400031288
PGSC0003DMT400033812
PGSC0003DMT400045658
PGSC0003DMT400045689
PGSC0003DMT400054836
PGSC0003DMT400055412
PGSC0003DMT400056711
PGSC0003DMT400071877
PGSC0003DMT400071885
PGSC0003DMT400071897
PGSC0003DMT400076065

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73660.1	PGSC0003DMT400020100	AT1G61520.1	24320620
AT1G73660.1	PGSC0003DMT400054836	AT1G61520.1	24320620
AT1G73660.1	PGSC0003DMT400016372	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400031288	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400033812	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400045658	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400045689	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400055412	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400056711	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400071877	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400071885	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400071897	AT4G08850.1	24320620
AT1G73660.1	PGSC0003DMT400012241	AT4G17250.1	24320620
AT1G73660.1	PGSC0003DMT400012242	AT4G17250.1	24320620
AT1G73660.1	PGSC0003DMT400012244	AT4G17250.1	24320620
AT1G73660.1	PGSC0003DMT400012245	AT4G17250.1	24320620
AT1G73660.1	PGSC0003DMT400076065	AT4G31670.1	24320620

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068980.2.1	Tomato	nucleus	94.16	86.35
VIT_17s0000g02540.t01	Wine grape	cytosol	68.8	60.41
KRH60519	Soybean	cytosol, plastid	65.71	58.66
KRH41805	Soybean	cytosol, plastid	64.61	57.62
KRH39096	Soybean	cytosol, plastid	63.29	56.16
KRH48620	Soybean	cytosol, plastid	63.51	56.14
Bra015976.1-P	Field mustard	cytosol	59.1	55.72
CDX96491	Canola	cytosol	59.1	55.31
AT1G73660.1	Thale cress	cytosol	61.85	54.47
CDX72999	Canola	cytosol	58.65	54.18
Bra025927.1-P	Field mustard	cytosol	58.88	53.78
CDY26183	Canola	cytosol	58.88	53.78
CDY19193	Canola	cytosol	58.77	53.46
AT1G18160.1	Thale cress	cytosol	58.43	53.43
GSMUA_Achr10P...	Banana	cytosol	50.61	50.22
Os06t0232100-02	Rice	plasma membrane	28.0	42.47
Zm00001d044814_P002	Maize	cytosol, plastid	49.17	40.66
TraesCS7B01G095300.2	Wheat	cytosol, plastid	47.52	40.58
HORVU7Hr1G038650.1	Barley	cytosol, plastid	47.52	40.58
TraesCS7D01G191400.1	Wheat	cytosol	47.52	40.51
KXG19659	Sorghum	cytosol, plastid	48.29	40.44
TraesCS7A01G190300.1	Wheat	cytosol	47.3	40.32
Os02t0743500-02	Rice	plasma membrane	49.17	40.14
TraesCS6A01G308500.1	Wheat	cytosol	48.18	39.3
EES07274	Sorghum	cytosol	48.51	39.15
TraesCS6D01G287700.1	Wheat	cytosol	47.85	39.13
HORVU6Hr1G076070.3	Barley	cytosol	47.74	39.11
TraesCS6B01G337200.1	Wheat	cytosol	47.74	38.94
Zm00001d018025_P001	Maize	cytosol	38.26	35.26
PGSC0003DMT400021612	Potato	cytosol	26.02	29.8
PGSC0003DMT400039618	Potato	cytosol	10.14	27.46
PGSC0003DMT400024156	Potato	cytosol	26.46	25.16
PGSC0003DMT400011959	Potato	nucleus	18.74	22.14
PGSC0003DMT400061713	Potato	cytosol	19.63	21.81
PGSC0003DMT400014794	Potato	cytosol	17.2	21.67
PGSC0003DMT400007850	Potato	nucleus	14.22	19.37
PGSC0003DMT400076173	Potato	nucleus	14.99	11.02
PGSC0003DMT400048262	Potato	cytosol	13.23	10.92
PGSC0003DMT400056866	Potato	cytosol	13.34	10.84
PGSC0003DMT400027083	Potato	cytosol	14.22	9.99

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1CT28	PFAM:PF07714	PFAM:PF14381	EnsemblPlantsGene:PGSC0003DMG401028784	PGSC:PGSC0003DMG401028784
EnsemblPlants:PGSC0003DMT400074057	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44741	PANTHER:PTHR44741:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002949636	SEG:seg	:	:	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401028784]

Coordinates

chr6:-:50685697..50695088

Molecular Weight (calculated)

98633.3 Da

IEP (calculated)

6.204

GRAVY (calculated)

-0.467

Length

907 amino acids

Sequence
(BLAST)

001: MKNFLKKLHI GSNQSEDSEG STSSSRSKKL SDVSSPEKHS SSRSYHGSDN KPFSAISGWL NSVTNRHSPS PPSSSNGNRG NRMDHSDSVS IGGADAVLDA
101: VQRDSESSSS RDPGVEEEYQ IQLALVLSAK EDPEAVQIEA VKQISLGSSA PENAPAEVVA YRYWNYNALS YDDKILDGFY DLYGVLMESN SSKMPSLIDL
201: QRTEVSDHIS WEAILVSKAA DSKLLKLEQR ALEIAVEERS NLMDFSASSL VHKLAVLVSD HMGGPVVDPE SMLLAWRSIS YNLKATLGSM VLPLGSLTIG
301: LARHRALLFK VLADSVGIPC RLVKGKQYTG SDDVAMNYVK IDGREYIVDL MAAPGTLIPS DTSGVHGDYE ESILSISPSS KDVDSHPGSY SSGIASSLGD
401: HSDYGTADKR SRFAESTSAG NESPSSGNSE LQVKAEKEFY NTFHDFTKAP SPKEQGQETS SRAGHARSAF THARSPSWTE GVSSPAAHKM KVKDASQYMI
501: DAAKENPQLA QKLHTVLLES GVIAPPNLFA EIYPEQLDVS HIEGKSRLEE RDEFQKVKGQ SDKNRARFLP PLPYHSPYSK GNARGSLEPQ PDVREVGEQQ
601: VSRQSEVAPP KHMKTVPVAA AAAAAAAAVA SSMVVVAAKT NPHGDLPVAA AATATAAAVV ATTAAVSKQY EAQGDCERVD GDADTAVYEQ QRSGHQEHEA
701: AGANSEGERM SDKSTGNDSA KSDVILDDVA DCEIPWEDIA LGERIGLGSY GEVYRGEWHG TEVAVKKFLD QDITGESLEE FRSEVRIMKR LRHPNVVLFM
801: GAVTRSPHLS IVTEFLHRGS LYRLIHRPHN QLDERRRLRM ALDAARGMNY LHNCTPMIVH RDLKSPNLLV DKNWVVKVCD FGLSRMKHST FLSSRSTAGT
901: VSRTVEV

Best Arabidopsis Sequence Match ( AT1G73660.1 )
(BLAST)

0001: MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK
0101: IPSPPNSFNA KNRAATVDDT VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE LIAYRYWNYN CLGYDDKILD
0201: GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW
0301: RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS
0401: ASPGDNDSIH VASSSNGIES SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR PIHSFTHMRS PSWTEGVSSP
0501: AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT
0601: NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG
0701: GHEPQGSGDS NHGPNSGGER ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ DLTGEALEEF RSEVRIMKKL
0801: RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY
0901: LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL
1001: KRLQKPVTGS NIPRPVPSSS SLPTEHEQKD

Arabidopsis Description

SIS8Probable serine/threonine-protein kinase SIS8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.