Factsheet for PGSC0003DMT400061713

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g059860.2.1	Tomato	cytosol	89.46	96.05
PGSC0003DMT400011959	Potato	nucleus	70.34	74.74
Bra001205.1-P	Field mustard	cytosol	27.21	74.5
CDY57621	Canola	cytosol	27.08	74.16
VIT_05s0077g00920.t01	Wine grape	cytosol	66.54	70.43
CDY57623	Canola	cytosol	26.59	70.23
TraesCS3B01G455600.1	Wheat	cytosol	23.41	68.95
KRH02358	Soybean	nucleus	63.73	67.44
KRH50723	Soybean	nucleus	63.48	67.27
CDY00031	Canola	cytosol	56.86	64.18
CDY34937	Canola	cytosol	57.72	64.08
CDY49603	Canola	nucleus	56.5	64.03
CDY34940	Canola	cytosol	57.72	63.91
KRH36968	Soybean	nucleus	56.13	63.17
GSMUA_Achr5P27150_001	Banana	cytosol	55.39	62.78
GSMUA_Achr3P24310_001	Banana	cytosol	54.53	62.24
CDY24677	Canola	cytosol	54.41	61.75
GSMUA_Achr11P...	Banana	cytosol	52.33	61.71
AT1G67890.1	Thale cress	nucleus	57.84	61.7
AT3G06620.1	Thale cress	cytosol	58.21	61.45
Bra040281.1-P	Field mustard	cytosol	58.82	61.3
CDY05282	Canola	cytosol	54.17	61.22
AT3G06630.2	Thale cress	cytosol	52.33	61.17
Bra036141.1-P	Field mustard	cytosol	55.51	60.56
EES16163	Sorghum	cytosol	55.64	60.05
Bra029593.1-P	Field mustard	cytosol	55.39	59.71
GSMUA_Achr8P06350_001	Banana	cytosol	55.15	58.82
TraesCS5A01G085900.2	Wheat	cytosol	54.17	58.7
TraesCS5B01G091700.1	Wheat	cytosol	54.04	58.57
HORVU5Hr1G022360.8	Barley	cytosol	54.04	58.18
TraesCS5D01G097900.1	Wheat	cytosol	53.68	58.17
CDX74096	Canola	cytosol	44.36	57.74
Os12t0562500-00	Rice	cytosol, plasma membrane	32.23	57.55
CDY70084	Canola	nucleus	40.81	57.22
AT3G06640.1	Thale cress	cytosol	50.74	56.71
AT5G49470.2	Thale cress	nucleus	56.5	55.48
Zm00001d030626_P003	Maize	cytosol	54.9	55.38
CDY24676	Canola	cytosol	49.14	55.31
Zm00001d041599_P004	Maize	cytosol, nucleus, plastid	54.66	54.39
EES08966	Sorghum	cytosol	47.18	54.38
HORVU6Hr1G078810.22	Barley	cytosol	42.4	53.64
Bra040282.1-P	Field mustard	cytosol	47.92	53.27
TraesCS6B01G352700.1	Wheat	cytosol	45.71	52.83
TraesCS6D01G301700.1	Wheat	cytosol	46.45	52.64
TraesCS5A01G396300.3	Wheat	nucleus	46.57	52.63
HORVU4Hr1G029350.6	Barley	cytosol	47.55	52.36
TraesCS4D01G143700.4	Wheat	cytosol	47.18	52.03
TraesCS3A01G420200.2	Wheat	cytosol	37.01	51.98
HORVU5Hr1G096760.15	Barley	nucleus	45.59	51.96
TraesCS6A01G321900.1	Wheat	cytosol	45.59	51.81
Bra029594.1-P	Field mustard	cytosol	48.28	51.5
CDY05283	Canola	cytosol	48.04	51.38
TraesCS4A01G171500.1	Wheat	cytosol	47.18	51.33
TraesCS4B01G127400.1	Wheat	cytosol	47.06	51.27
TraesCSU01G156700.4	Wheat	cytosol	47.18	51.2
TraesCS3A01G420300.2	Wheat	cytosol	44.61	51.05
HORVU3Hr1G093140.13	Barley	cytosol	39.22	50.63
TraesCS3D01G415900.2	Wheat	cytosol	44.36	50.49
TraesCS3D01G415800.1	Wheat	cytosol	39.09	50.47
Os12t0562600-01	Rice	cytosol	4.53	49.33
TraesCS5D01G405700.1	Wheat	nucleus	33.7	47.58
TraesCS5D01G405800.1	Wheat	mitochondrion	46.08	47.3
TraesCS5B01G401200.1	Wheat	nucleus	45.83	46.63
PGSC0003DMT400039618	Potato	cytosol	14.09	34.33
PGSC0003DMT400007850	Potato	nucleus	25.49	31.23
PGSC0003DMT400014794	Potato	cytosol	27.33	30.97
PGSC0003DMT400021612	Potato	cytosol	24.75	25.51
PGSC0003DMT400024156	Potato	cytosol	24.14	20.65
PGSC0003DMT400074057	Potato	cytosol, plastid	21.81	19.63
PGSC0003DMT400056866	Potato	cytosol	18.01	13.17
PGSC0003DMT400048262	Potato	cytosol	17.52	13.01
PGSC0003DMT400027083	Potato	cytosol	18.5	11.7
PGSC0003DMT400076173	Potato	nucleus	17.65	11.67

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102580545	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1C7W6
InterPro:PAS	InterPro:PAS-like_dom_sf	PFAM:PF07714	PFAM:PF13426	EnsemblPlantsGene:PGSC0003DMG400024018	PGSC:PGSC0003DMG400024018
EnsemblPlants:PGSC0003DMT400061713	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676
PANTHER:PTHR44676:SF2	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI000296E4C4	SEG:seg	:	:

Description

Map3k delta-1 protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400024018]

Coordinates

chr1:+:45775323..45783532

Molecular Weight (calculated)

91284.1 Da

IEP (calculated)

6.801

GRAVY (calculated)

-0.578

Length

816 amino acids

Sequence
(BLAST)

001: MEEPTVLAKV ATPPTEELLK KIQELEAGHA QLKQEMSKLM VSNDSTSQRQ RSHSISPQRP PRLRGSNDPL GKKGSTSFRH SSPLQRESSS KTERCSSSSS
101: SSGGVKFTDK QYLSILQSMG QAVHIFDLNY RLIYWTWERK EGKPLIGISF VLDRVHNHEL SNSNFDVFSN LSKLWWTELP GIGDGGRNRS AEQLYGYSAA
201: EAIGQDLLEL ITDPKDHAVA KIIIHRVKMG ENWTGQFPVK NKQGDRFLVV ATDTPLYDDD GTFVGIICVS TDARPFHESS ADVKHTEADK SSGRPRNIAN
301: ATLGLDPQQP LQAAIASKIS NLATKMSNKV KSKMKTGEGS ILREGGSGDS HHSDHAFSDA ALLDQREDAN SSGASTPRGD VHFSPFGVFT NVAKEEHTPE
401: KSSRDSGDES EGKPGISKII TSKAEAWMVK KNLSWPWKGN EREVSEAKAT RFVWPWLNND QDNEWNHFKS SNAVSTPDDQ IMESNRTATN EAWGSWSSSF
501: NVNSTSSASS TDSTTSTAVN KVDADTDCLD YEILWEDMTI GEQIGQGSCG TVYHGLWFGS DVAVKVFSKQ EYSDDVIYSF RQEVSLMKRL RHPNILLFMG
601: AVTSPQRLCI VTEFLPRGSL FRLLQRNASK LEWRRRIHMA LDIARGMNYL HHFNPPIVHR DLKSSNLLVD KNWTVKVGDF GLSRLKHETY LTTKNGKGTP
701: QWMAPEVLRN EPSDEKADIY SFGVILWELA TEKIPWDNLN SMQVIGAVGF MNQRLDIPKN VDPQWVSIIE SCWHSEPQLC PTFLELVDKL KDMLRQYAIQ
801: AQAARNVAGD SSQKEL

Best Arabidopsis Sequence Match ( AT5G49470.3 )
(BLAST)

001: MEKTTPPAEE LLKKIRELEE SQEHLKREMS RLKVSAEMKQ RSHSASPQRP VRRNSNDGTP MWRKTGAASF RHASPLRKES HAKVAGGGGE GQSAGKFTDK
101: QYLNILQSMA QAVHVFDLNG QIIFWNSMAE KLYGFSASEA LGKDPIDILV DVQDASVAQN ITRRCSSGES WTGEFPVKNK AGERFSVVTT MSPSYDDDGC
201: LIGIICITND SALFQDPRGS PAKTRRGQEG ETSFSRVTSS VASKLGLDSK EAVVSKLGLD SQQPIQVAIA SKISDLASKV GNKVKSKMRA GDNNAANLEG
301: GSGDSHQSDQ GFFDAAFADR REDAATSGAD TPRGDFIQSP FGVFLRSDEK ASTKPFRDSS DESDGNSVVP KTLTSKAEEW MVKKGLSWPW KGNEREGLEG
401: RRSHSVWPWV RNEQQKQQAY QSNSNHSVKS ESQACESIKA SSNEPMGYWS SSVNVNSTSS SSSCGSTSSS VMNKVDMDSD CLDYEILWED LTIGEQIGQG
501: SCGTVYHGLW FGSDVAVKVF SKQEYSEEII TSFRQEVSLM KRLRHPNVLL FMGAVTSPQR LCIVTEFLPR GSLFRLLQRN TSKLDWRRRI HMASDIARGM
601: NYLHHCTPPI IHRDLKSSNL LVDKNWTVKV ADFGLSRIKH ETYLTTKTGR GTPQWMAPEV LRNEAADEKS DVYSFGVILW ELVTEKIPWE SLNAMQVIGA
701: VGFMNQRLEV PKNVDPQWIS LMESCWHSEP QDRPSFQEIM EKLRELQRKY TIQFQAARAA SIENSALKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K645]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.