Factsheet for Os12t0562500-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16163	Sorghum	cytosol	81.84	49.47
TraesCS5B01G091700.1	Wheat	cytosol	80.96	49.14
TraesCS5A01G085900.2	Wheat	cytosol	80.74	49.0
HORVU5Hr1G022360.8	Barley	cytosol	81.18	48.94
TraesCS5D01G097900.1	Wheat	cytosol	80.09	48.61
Zm00001d030626_P003	Maize	cytosol	78.34	44.25
Zm00001d041599_P004	Maize	cytosol, nucleus, plastid	78.99	44.02
Os11t0678000-01	Rice	cytosol	19.91	37.45
GSMUA_Achr3P24310_001	Banana	cytosol	56.89	36.36
GSMUA_Achr8P06350_001	Banana	cytosol	59.96	35.82
CDY70084	Canola	nucleus	45.3	35.57
GSMUA_Achr5P27150_001	Banana	cytosol	55.8	35.42
KRH50723	Soybean	nucleus	58.86	34.94
VIT_05s0077g00920.t01	Wine grape	cytosol	58.64	34.76
KRH02358	Soybean	nucleus	58.64	34.76
GSMUA_Achr11P...	Banana	cytosol	52.3	34.54
CDY49603	Canola	nucleus	54.05	34.31
Solyc01g059860.2.1	Tomato	cytosol	56.67	34.08
CDY00031	Canola	cytosol	53.61	33.89
KRH36968	Soybean	nucleus	53.39	33.66
Bra036141.1-P	Field mustard	cytosol	53.83	32.89
Solyc12g099250.1.1	Tomato	cytosol	54.92	32.77
CDY34937	Canola	cytosol	52.3	32.52
CDY34940	Canola	cytosol	52.3	32.43
PGSC0003DMT400011959	Potato	nucleus	54.49	32.42
PGSC0003DMT400061713	Potato	cytosol	57.55	32.23
AT3G06630.2	Thale cress	cytosol	48.14	31.52
AT1G67890.1	Thale cress	nucleus	52.52	31.37
CDY05282	Canola	cytosol	49.45	31.3
CDY24677	Canola	cytosol	49.23	31.29
Bra040281.1-P	Field mustard	cytosol	52.74	30.78
AT3G06620.1	Thale cress	cytosol	51.86	30.66
AT3G06640.1	Thale cress	cytosol	48.58	30.41
AT5G49470.2	Thale cress	nucleus	54.27	29.84
Bra029593.1-P	Field mustard	cytosol	49.23	29.72
Bra040282.1-P	Field mustard	cytosol	47.05	29.29
CDX74096	Canola	cytosol	37.86	27.59
CDY24676	Canola	cytosol	42.23	26.62
CDY57621	Canola	cytosol	16.63	25.5
Bra001205.1-P	Field mustard	cytosol	16.19	24.83
CDY05283	Canola	cytosol	41.36	24.77
Bra029594.1-P	Field mustard	cytosol	41.36	24.71
CDY57623	Canola	cytosol	16.19	23.95
Os02t0527600-01	Rice	cytosol	19.91	11.65
Os04t0610900-01	Rice	mitochondrion	17.72	10.41
Os06t0232100-02	Rice	plasma membrane	13.35	10.2
Os02t0220700-01	Rice	plasma membrane	17.72	10.19
Os09t0566550-01	Rice	cytosol, plastid	16.19	9.85
Os10t0430900-01	Rice	cytosol	20.57	9.67
Os03t0160100-01	Rice	nucleus	19.04	8.55
Os06t0181200-01	Rice	cytosol	8.75	8.44
Os02t0743500-02	Rice	plasma membrane	19.26	7.92
Os01t0674100-02	Rice	cytosol	13.13	7.49
Os02t0241600-01	Rice	plasma membrane	11.82	6.84
Os03t0401100-01	Rice	plasma membrane	9.41	6.77
Os12t0594300-00	Rice	cytosol	14.0	5.57
Os06t0646400-01	Rice	plasma membrane	11.82	4.86
Os02t0786200-01	Rice	plasma membrane	7.66	4.46
Os06t0181100-01	Rice	nucleus	4.16	3.79
Os07t0438500-01	Rice	plasma membrane	5.69	3.02
Os12t0594200-00	Rice	cytosol	0.0	0.0
Os12t0562600-01	Rice	cytosol	0.0	0.0
Os07t0438550-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.200.20	Gene3D:3.30.450.20	MapMan:50.2.7	ProteinID:BAF30048.1	ProteinID:BAT17657.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os12g0562500	EnsemblPlants:Os12t0562500-00	InterPro:PAS	InterPro:PAS-like_dom_sf
InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676
PANTHER:PTHR44676:SF2	InterPro:Prot_kinase_dom	UniProt:Q0IML7	SMART:SM00091	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	TIGRFAMs:TIGR00229	UniParc:UPI0000DD9F1B	SEG:seg	:	:

Description

Similar to Protein kinase-like protein (Fragment). (Os12t0562500-00)

Coordinates

chr12:+:23061642..23065235

Molecular Weight (calculated)

50021.0 Da

IEP (calculated)

5.359

GRAVY (calculated)

-0.603

Length

457 amino acids

Sequence
(BLAST)

001: GGGLTEKQYT RVLQSLGQSV HILDLEGKIM YWNRSAEKLY GYPASEALGQ DGLMLLIDSC DINVVNDIFR RISLGESWTG KFPVKNRAGD RFSAVATNTP
101: FYDEDGSLVG IVCVSSDLRT MEEIISGPSI CARPHPESSR TYCEASCSNS NRKASLLSRS PFDSQQPLQS TIASKITNLA TKVTNKVRSR VRADENGIER
201: EGGSGESHCS DRDAKEEPTS SGTTTPRGDA PRGAFATEES SPGKTAKMNS DESEGKVGFH RILSSKAEAL LNKKGISWPW KGRDNDGPDV KNQATWPWLH
301: GEQDGSQNHQ KISDSAITQD GQGAEYNQPN KNEASGSWSS FNNNSTSSAS STGSTNSSAL YKVDHEADCL DYEILWEDLV IGEQIGQGSC GTVYHALWYG
401: SDVAVKVFSK QEYSEEVIQT FRQEVSLMKK LRHPNILLFM GAVTSPQRLC IVTEFLP

Best Arabidopsis Sequence Match ( AT5G49470.5 )
(BLAST)

001: MEKTTPPAEE LLKKIRELEE SQEHLKREMS RLKVSAEMKQ RSHSASPQRP VRRNSNDGTP MWRKTGAASF RHASPLRKES HAKVAGGGGE GQSAGKFTDK
101: QYLNILQSMA QAVHVFDLNG QIIFWNSMAE KLYGFSASEA LGKDPIDILV DVQDASVAQN ITRRCSSGES WTGEFPVKNK AGERFSVVTT MSPSYDDDGC
201: LIGIICITND SALFQDPRGS PAKTRRGQEG ETSFSRVTSS VASKLGLDSK EAVVSKLGLD SQQPIQVAIA SKISDLASKV GNKVKSKMRA GDNNAANLEG
301: GSGDSHQSDQ GFFDAAFADR REDAATSGAD TPRGDFIQSP FGVFLRSDEK ASTKPFRDSS DESDGNSVVP KTLTSKAEEW MVKKGLSWPW KGNEREGLEG
401: RRSHSVWPWV RNEQQKQQAY QSNSNHSVKS ESQACESIKA SSNEPMGYWS SSVNVNSTSS SSSCGSTSSS VMNKVDMDSD CLDYEILWED LTIGEQIGQG
501: SCGTVYHGLW FGSDVAVKVF SKQEYSEEII TSFRQEVSLM KRLRHPNVLL FMGAVTSPQR LCIVTEFLPR GSLFRLLQRN TSKLDWRRRI HMASDIARGM
601: NYLHHCTPPI IHRDLKSSNL LVDKNWTVKV ADFGLSRIKH ETYLTTKTGR GTPQWMAPEV LRNEAADEKS DVYSFGVILW ELVTEKIPWE SLNAMQV

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K645]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.