Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0562500-00 | Rice | cytosol, plasma membrane | 37.45 | 19.91 |
| Os02t0220700-01 | Rice | plasma membrane | 14.81 | 4.53 |
| Os06t0181100-01 | Rice | nucleus | 7.82 | 3.79 |
| Os04t0610900-01 | Rice | mitochondrion | 11.93 | 3.73 |
| Os02t0743500-02 | Rice | plasma membrane | 15.64 | 3.42 |
| Os03t0160100-01 | Rice | nucleus | 13.17 | 3.15 |
| Os10t0430900-01 | Rice | cytosol | 12.35 | 3.09 |
| Os02t0527600-01 | Rice | cytosol | 9.47 | 2.94 |
| Os07t0438500-01 | Rice | plasma membrane | 10.29 | 2.9 |
| Os09t0566550-01 | Rice | cytosol, plastid | 8.64 | 2.8 |
| Os03t0401100-01 | Rice | plasma membrane | 7.0 | 2.68 |
| Os02t0241600-01 | Rice | plasma membrane | 7.82 | 2.41 |
| Os01t0674100-02 | Rice | cytosol | 7.41 | 2.25 |
| Os02t0786200-01 | Rice | plasma membrane | 5.35 | 1.66 |
| Os12t0594300-00 | Rice | cytosol | 7.0 | 1.48 |
| Os06t0646400-01 | Rice | plasma membrane | 4.94 | 1.08 |
| Os12t0594200-00 | Rice | cytosol | 0.82 | 0.19 |
| Os07t0438550-01 | Rice | cytosol | 0.0 | 0.0 |
| Os06t0232100-02 | Rice | plasma membrane | 0.0 | 0.0 |
| Os12t0562600-01 | Rice | cytosol | 0.0 | 0.0 |
| Os06t0181200-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.450.20 | MapMan:35.2 | UniProt:A0A0P0Y5C3 | ProteinID:BAT15235.1 | ncoils:Coil | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000014 |
| EnsemblPlantsGene:Os11g0678000 | EnsemblPlants:Os11t0678000-01 | InterPro:PAS | InterPro:PAS-like_dom_sf | InterPro:PAS_fold | PFAM:PF00989 |
| PFscan:PS50112 | PANTHER:PTHR44676 | PANTHER:PTHR44676:SF1 | SMART:SM00091 | SUPFAM:SSF55785 | TIGRFAMs:TIGR00229 |
| UniParc:UPI0003939B7B | SEG:seg | : | : | : | : |
Description
Similar to PAS domain containing protein, expressed. (Os11t0678000-01)
Coordinates
chr11:+:27399450..27406535
Molecular Weight (calculated)
26753.1 Da
IEP (calculated)
9.798
GRAVY (calculated)
-0.393
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAELVKKI RELEEGQAEL KREISRIVPE RGGARRPPTL PAQQRRTALP QAAAAAPSSR LLQRVGRAGL PDRHYVRILH SLGQAVHVIS LDGKLMYWNR
101: YAEHLYGYSV PEAVGQDALE LIVHPSDYGA ANDIIQNIFM GKCWRGKFPV KHKSGERFNI VASNTPLYDD DGSLVGLICL STDTRTLEEI LGHSTSGKVY
201: PSSAKPRVQL NGSKSGLLNK VSCDSQQPLQ SAITSRITNL GYK
101: YAEHLYGYSV PEAVGQDALE LIVHPSDYGA ANDIIQNIFM GKCWRGKFPV KHKSGERFNI VASNTPLYDD DGSLVGLICL STDTRTLEEI LGHSTSGKVY
201: PSSAKPRVQL NGSKSGLLNK VSCDSQQPLQ SAITSRITNL GYK
001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK
Arabidopsis Description
PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.