Factsheet for TraesCS5D01G405700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G096760.15	Barley	nucleus	87.89	70.95
TraesCS5D01G405800.1	Wheat	mitochondrion	85.29	62.01
TraesCS6D01G301700.1	Wheat	cytosol	72.15	57.92
TraesCS3D01G415900.2	Wheat	cytosol	66.95	53.97
TraesCS4D01G143700.4	Wheat	cytosol	68.86	53.78
TraesCS3D01G415800.1	Wheat	cytosol	57.79	52.85
EES08966	Sorghum	cytosol	61.94	50.56
TraesCS5D01G097900.1	Wheat	cytosol	53.29	40.9
GSMUA_Achr3P24310_001	Banana	cytosol	48.27	39.02
CDY70084	Canola	nucleus	39.1	38.83
GSMUA_Achr5P27150_001	Banana	cytosol	47.92	38.47
GSMUA_Achr8P06350_001	Banana	cytosol	49.83	37.65
GSMUA_Achr11P...	Banana	cytosol	44.64	37.28
VIT_05s0077g00920.t01	Wine grape	cytosol	48.27	36.19
Solyc01g059860.2.1	Tomato	cytosol	46.89	35.66
Bra001205.1-P	Field mustard	cytosol	18.34	35.57
CDY57621	Canola	cytosol	18.34	35.57
Solyc12g099250.1.1	Tomato	cytosol	46.89	35.38
KRH50723	Soybean	nucleus	47.06	35.32
PGSC0003DMT400011959	Potato	nucleus	46.89	35.29
KRH36968	Soybean	nucleus	43.94	35.03
KRH02358	Soybean	nucleus	46.71	35.02
CDY49603	Canola	nucleus	43.25	34.72
CDY00031	Canola	cytosol	43.25	34.58
CDY34937	Canola	cytosol	43.77	34.42
CDY24677	Canola	cytosol	42.73	34.35
CDY34940	Canola	cytosol	43.77	34.33
CDY05282	Canola	cytosol	42.73	34.21
AT3G06630.2	Thale cress	cytosol	41.18	34.1
PGSC0003DMT400061713	Potato	cytosol	47.58	33.7
AT1G67890.1	Thale cress	nucleus	44.46	33.59
Bra029593.1-P	Field mustard	cytosol	43.08	32.89
AT3G06620.1	Thale cress	cytosol	43.94	32.86
Bra040281.1-P	Field mustard	cytosol	44.29	32.69
CDY57623	Canola	cytosol	17.47	32.69
CDX74096	Canola	cytosol	35.12	32.38
Bra036141.1-P	Field mustard	cytosol	41.18	31.82
AT3G06640.1	Thale cress	cytosol	39.97	31.64
Bra040282.1-P	Field mustard	cytosol	39.45	31.06
CDY24676	Canola	cytosol	38.06	30.34
AT5G49470.2	Thale cress	nucleus	42.73	29.72
Bra029594.1-P	Field mustard	cytosol	37.72	28.5
CDY05283	Canola	cytosol	36.51	27.65
TraesCS4D01G010200.1	Wheat	plastid	20.07	15.06
TraesCS6D01G173100.2	Wheat	mitochondrion	21.97	14.68
TraesCS2D01G424300.1	Wheat	mitochondrion	19.2	14.51
TraesCS1D01G136400.2	Wheat	cytosol, plastid	20.93	12.58
TraesCS7D01G191400.1	Wheat	cytosol	22.15	12.03
TraesCS6D01G287700.1	Wheat	cytosol	23.01	11.99
TraesCS4D01G274400.2	Wheat	mitochondrion	22.15	11.85
TraesCS6D01G180500.1	Wheat	cytosol	16.26	10.97
TraesCS3D01G270900.1	Wheat	cytosol	14.71	10.69
TraesCS5D01G407700.1	Wheat	cytosol	12.8	9.54
TraesCS6D01G327400.1	Wheat	cytosol	15.05	7.96
TraesCS5D01G560600.1	Wheat	cytosol, plastid	16.09	7.59
TraesCS7D01G500900.1	Wheat	cytosol	14.36	7.53
TraesCS5D01G074400.1	Wheat	cytosol	14.53	7.47
TraesCS7D01G146400.1	Wheat	cytosol, plastid	12.98	6.89

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.30.450.20	MapMan:50.2.7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:PAS	InterPro:PAS-like_dom_sf	InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676	PANTHER:PTHR44676:SF1	InterPro:Prot_kinase_dom
SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TIGRFAMs:TIGR00229	EnsemblPlantsGene:TraesCS5D01G405700	EnsemblPlants:TraesCS5D01G405700.1	TIGR:cd00130	SEG:seg	:

Description

No Description!

Coordinates

chr5D:+:470481917..470493224

Molecular Weight (calculated)

64926.6 Da

IEP (calculated)

7.185

GRAVY (calculated)

-0.552

Length

578 amino acids

Sequence
(BLAST)

001: MEAEELLRKI RELEEGQAEL LREMGRLAPE RRGSGGAQRA ADRRRRPPSP ALPPRHPSLS RALPDSSPRP LRDNRARLSD RHCHWILQSL GQAVHIIAPD
101: GKLLYWNRYA EHMYGYSASE AIGQDAVELI VHPTDFDAAN IIIQNIFMGK CFRGKFPVKN KSGERFFIVV HNTPLYDDDG SLIGLICLSL DVRTLEEIFC
201: PSVTENSYQN SAKPHFHVNS RIESGSQNKG SFDSQRPLQS AITSKITTFA TKLTSRVPSR TRTGQNWERQ CASGSEDQYS EHDVRADLTS SEASTPNEDV
301: QSGVFAAVEK SPGQLSKTST DDSGEGKVGF HKMFSSEPEE LLAKKGISWP RKGRENDGGS GRSNITSTHL HDKQENDQSH QRVPVLEPII IPDCQDSEYA
401: QSGFWWTFNN TSSMSSTSTS GSPIERVDYE VDCLHYEILW EDLVIGEQVG QGSCGTVYHA LWYGSDVAVK LFSRQEYSEE MINTFRQEVS LMKKLRHPSI
501: ILFMGAVASH ERLCIVTEFL PRGSLFQLLR KNTSKLDPRR KLNMAIDIAR GMNYLHNSIP AIVHRDLKSS NLLIKIGL

Best Arabidopsis Sequence Match ( AT1G67890.2 )
(BLAST)

001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHRYINHIKH YIYLARGK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.