Factsheet for TraesCS6D01G301700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G352700.1	Wheat	cytosol	94.58	96.46
TraesCS6A01G321900.1	Wheat	cytosol	96.11	96.38
HORVU6Hr1G078810.22	Barley	cytosol	82.78	92.4
TraesCS3D01G415900.2	Wheat	cytosol	81.94	82.29
TraesCS3D01G415800.1	Wheat	cytosol	72.08	82.12
TraesCS5D01G405700.1	Wheat	nucleus	57.92	72.15
TraesCS4D01G143700.4	Wheat	cytosol	72.08	70.14
TraesCS5D01G405800.1	Wheat	mitochondrion	75.69	68.55
EES08966	Sorghum	cytosol	65.97	67.09
Bra001205.1-P	Field mustard	cytosol	27.5	66.44
CDY57621	Canola	cytosol	27.08	65.44
CDY57623	Canola	cytosol	25.97	60.52
TraesCS5D01G097900.1	Wheat	cytosol	57.78	55.25
GSMUA_Achr3P24310_001	Banana	cytosol	53.61	53.99
GSMUA_Achr5P27150_001	Banana	cytosol	52.78	52.78
GSMUA_Achr11P...	Banana	cytosol	50.14	52.17
KRH36968	Soybean	nucleus	51.11	50.76
GSMUA_Achr8P06350_001	Banana	cytosol	53.89	50.72
KRH50723	Soybean	nucleus	53.61	50.13
KRH02358	Soybean	nucleus	53.33	49.81
Solyc12g099250.1.1	Tomato	cytosol	52.92	49.74
CDY49603	Canola	nucleus	49.72	49.72
PGSC0003DMT400011959	Potato	nucleus	52.92	49.61
VIT_05s0077g00920.t01	Wine grape	cytosol	52.92	49.42
Solyc01g059860.2.1	Tomato	cytosol	52.08	49.34
CDY00031	Canola	cytosol	49.31	49.1
CDY24677	Canola	cytosol	48.06	48.12
CDY05282	Canola	cytosol	48.19	48.06
CDY34937	Canola	cytosol	48.33	47.35
CDY34940	Canola	cytosol	48.33	47.22
AT3G06630.2	Thale cress	cytosol	45.56	46.99
CDX74096	Canola	cytosol	40.56	46.57
PGSC0003DMT400061713	Potato	cytosol	52.64	46.45
AT1G67890.1	Thale cress	nucleus	49.17	46.27
Bra029593.1-P	Field mustard	cytosol	48.33	45.97
Bra036141.1-P	Field mustard	cytosol	47.5	45.72
AT3G06620.1	Thale cress	cytosol	48.61	45.28
CDY70084	Canola	nucleus	36.25	44.85
Bra040281.1-P	Field mustard	cytosol	48.61	44.7
AT3G06640.1	Thale cress	cytosol	45.28	44.66
CDY24676	Canola	cytosol	43.47	43.17
AT5G49470.2	Thale cress	nucleus	48.33	41.88
Bra029594.1-P	Field mustard	cytosol	44.03	41.44
Bra040282.1-P	Field mustard	cytosol	42.08	41.28
CDY05283	Canola	cytosol	43.19	40.76
TraesCS4D01G010200.1	Wheat	plastid	25.83	24.16
TraesCS6D01G173100.2	Wheat	mitochondrion	28.47	23.7
TraesCS2D01G424300.1	Wheat	mitochondrion	25.0	23.53
TraesCS1D01G136400.2	Wheat	cytosol, plastid	27.92	20.89
TraesCS7D01G191400.1	Wheat	cytosol	28.19	19.08
TraesCS6D01G287700.1	Wheat	cytosol	28.89	18.76
TraesCS4D01G274400.2	Wheat	mitochondrion	27.78	18.52
TraesCS5D01G407700.1	Wheat	cytosol	18.61	17.27
TraesCS6D01G180500.1	Wheat	cytosol	20.28	17.04
TraesCS3D01G270900.1	Wheat	cytosol	18.75	16.98
TraesCS5D01G074400.1	Wheat	cytosol	19.31	12.36
TraesCS6D01G327400.1	Wheat	cytosol	18.75	12.35
TraesCS7D01G146400.1	Wheat	cytosol, plastid	18.06	11.95
TraesCS7D01G500900.1	Wheat	cytosol	18.19	11.89
TraesCS5D01G560600.1	Wheat	cytosol, plastid	20.0	11.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000014	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:PAS	InterPro:PAS-like_dom_sf
PFAM:PF07714	PFAM:PF13426	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112
PANTHER:PTHR44676	PANTHER:PTHR44676:SF1	InterPro:Prot_kinase_dom	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	EnsemblPlantsGene:TraesCS6D01G301700	EnsemblPlants:TraesCS6D01G301700.1
TIGR:cd00130	TIGR:cd13999	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:411401545..411407358

Molecular Weight (calculated)

80391.1 Da

IEP (calculated)

8.253

GRAVY (calculated)

-0.522

Length

720 amino acids

Sequence
(BLAST)

001: MEADELLKKI RALEEGQAEL KREVGRLMPD RRAAARRRAL RALLPPPPRP SSSSRRVAAR GRLPDRHCHW ILQSLGQAVH IIAPDGKLLY WNRYAEHMYG
101: YTAAEAVGRN AVELIVHPTD FDSAKIIIQN IFMGKCWRGR FPVKNKAGER FFISVHNTPL YDDDGSLVGL ICLSLDVRAL EEIFSPSDSA ESYQSTAKHR
201: FHANNRPTSG SVNKGSLHSQ QPPQSAVTSK IVTLATSVTS RVRSRIRIGQ NSDKLYGGGC EGQYSQLDLQ AEVASSEENT PSGDVVHGAF AAQEKSLGKS
301: SKTSSDDPGE GKVGSYKIFR SKAEALLAKK GISWPWRGHE NDGGSGKNNV NSTQLQDKQE NDQSHQKVPV LEPIIIPDCQ SSEDTWATKY EVSGSWWDFN
401: KNNTSSMSST GSTDSSGIER VDYEADCLDY EILWEDLVIG EQVGQGCCGT VYHALWYGSD VAAKVFSKQE YSEEMINTFR QEVSLMKKLR HPNIILFMGA
501: VASQERLCIV TEFLPRGSLF RLLQSNIGKL DPRRRVNMAI DIARGMNYLH SSIPTVVHRD LKSPNLLVDK NWTVKVADFG LSRLKLETFL STKTGKGTPQ
601: WMAPEVLRSE PSNEKSDVFS YGVVLWELAT QKIPWDTLNT MQVIGAVGFM DHRLEIPSDV DPQWASMIES CWESEPQRRP SFRELLERLQ GLQKQYTVQA
701: QTERKAAGKG ARKASVKDDG

Best Arabidopsis Sequence Match ( AT1G67890.1 )
(BLAST)

001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.