Factsheet for TraesCS5D01G405800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G396300.3	Wheat	nucleus	83.77	92.24
TraesCS5B01G401200.1	Wheat	nucleus	91.7	90.9
HORVU5Hr1G096760.15	Barley	nucleus	78.74	87.43
TraesCS5D01G405700.1	Wheat	nucleus	62.01	85.29
TraesCS6D01G301700.1	Wheat	cytosol	68.55	75.69
TraesCS3D01G415800.1	Wheat	cytosol	58.24	73.26
TraesCS3D01G415900.2	Wheat	cytosol	64.91	71.97
TraesCS4D01G143700.4	Wheat	cytosol	66.04	70.95
EES08966	Sorghum	cytosol	59.62	66.95
Bra001205.1-P	Field mustard	cytosol	25.03	66.78
CDY57621	Canola	cytosol	24.78	66.11
CDY57623	Canola	cytosol	23.77	61.16
TraesCS5D01G097900.1	Wheat	cytosol	53.33	56.31
GSMUA_Achr3P24310_001	Banana	cytosol	48.93	54.41
GSMUA_Achr5P27150_001	Banana	cytosol	48.43	53.47
GSMUA_Achr11P...	Banana	cytosol	45.79	52.6
GSMUA_Achr8P06350_001	Banana	cytosol	49.81	51.76
KRH36968	Soybean	nucleus	45.53	49.93
KRH50723	Soybean	nucleus	48.18	49.74
VIT_05s0077g00920.t01	Wine grape	cytosol	48.18	49.68
PGSC0003DMT400011959	Potato	nucleus	47.67	49.35
Solyc12g099250.1.1	Tomato	cytosol	47.42	49.22
Solyc01g059860.2.1	Tomato	cytosol	46.92	49.08
KRH02358	Soybean	nucleus	47.42	48.9
CDY49603	Canola	nucleus	43.4	47.92
CDX74096	Canola	cytosol	37.11	47.05
CDY00031	Canola	cytosol	42.77	47.03
AT3G06630.2	Thale cress	cytosol	41.13	46.85
CDY34937	Canola	cytosol	43.14	46.67
CDY24677	Canola	cytosol	42.14	46.59
CDY34940	Canola	cytosol	43.02	46.4
CDY05282	Canola	cytosol	42.01	46.26
PGSC0003DMT400061713	Potato	cytosol	47.3	46.08
AT1G67890.1	Thale cress	nucleus	43.77	45.49
AT3G06620.1	Thale cress	cytosol	43.77	45.02
Bra029593.1-P	Field mustard	cytosol	42.77	44.91
Bra036141.1-P	Field mustard	cytosol	41.89	44.52
CDY70084	Canola	nucleus	32.58	44.5
Bra040281.1-P	Field mustard	cytosol	43.77	44.44
AT3G06640.1	Thale cress	cytosol	40.63	44.25
CDY24676	Canola	cytosol	39.5	43.31
Bra040282.1-P	Field mustard	cytosol	38.11	41.28
AT5G49470.2	Thale cress	nucleus	43.02	41.16
Bra029594.1-P	Field mustard	cytosol	39.5	41.05
CDY05283	Canola	cytosol	38.49	40.1
TraesCS4D01G010200.1	Wheat	plastid	24.65	25.45
TraesCS6D01G173100.2	Wheat	mitochondrion	26.67	24.51
TraesCS2D01G424300.1	Wheat	mitochondrion	22.89	23.79
TraesCS1D01G136400.2	Wheat	cytosol, plastid	25.16	20.79
TraesCS7D01G191400.1	Wheat	cytosol	26.04	19.45
TraesCS6D01G287700.1	Wheat	cytosol	26.54	19.03
TraesCS4D01G274400.2	Wheat	mitochondrion	25.66	18.89
TraesCS3D01G270900.1	Wheat	cytosol	17.99	17.99
TraesCS6D01G180500.1	Wheat	cytosol	18.87	17.5
TraesCS5D01G407700.1	Wheat	cytosol	15.85	16.24
TraesCS5D01G074400.1	Wheat	cytosol	17.61	12.44
TraesCS6D01G327400.1	Wheat	cytosol	16.98	12.35
TraesCS7D01G500900.1	Wheat	cytosol	16.86	12.16
TraesCS5D01G560600.1	Wheat	cytosol, plastid	18.24	11.83
TraesCS7D01G146400.1	Wheat	cytosol, plastid	16.1	11.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	ncoils:Coil	GO:GO:0000155
GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000014	InterPro:IPR000700
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:PAS	InterPro:PAS-assoc_C	InterPro:PAS-like_dom_sf	InterPro:PAS_fold
PFAM:PF00989	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112
PFscan:PS50113	PANTHER:PTHR44676	PANTHER:PTHR44676:SF1	InterPro:Prot_kinase_dom	SMART:SM00091	SMART:SM00220
SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	EnsemblPlantsGene:TraesCS5D01G405800
EnsemblPlants:TraesCS5D01G405800.1	TIGR:cd00130	TIGR:cd13999	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:470750033..470757948

Molecular Weight (calculated)

88987.7 Da

IEP (calculated)

8.982

GRAVY (calculated)

-0.546

Length

795 amino acids

Sequence
(BLAST)

001: MRMRQHRAAA GSAGGMSGMA PRHAAPRRPP PSLHYVKREP VRRWPCCLGL LPAARSLTEP ASYRAAMEAD GLLRKIRELE QGQAQLVREM GRLAPGPRGA
101: KAQPGPSGRP AFPPRHPSPW RRALAALQDP SPRQLRDNRA RLSDRHCHWI LQSLGQAVHI IAPDGKLLYW NRYAEHMYGY SASEAIGQDA IELIVHPTDF
201: DAANVVIQNI FMGKCFRGKF PVKNKSGERF FIVVHNTPLY DDDGSLIGLI CVSLDVRTLQ EIFSPSTTEK SCQSSSKPHF HVNNWPKSGS QNKGSFDSQQ
301: PLQSASTSKI TTFATKLTSR VRSRIRTGQN CERRCASGCE DQYSEHDVRA DLTSSEASTP NGDVRYGAFV AEEKSPGELS KTNIDDSGEG KVGFHKMFSS
401: KAEVLLAKKG ISWPRKGREN DGGSGKSNIP STHLHDKQAN DQSHQRVPVV QPIIIPDCQD TKYAHSSKYE FSGSWWTFNN TSSISSTSTI GSPIERVDYE
501: ADCLDYEILW EDLVIGEQVG QGSCGTVYHA LWYGSDVAVK LFSKQEYSEE MINTFRQEVS LMKKLRHPSI ILFMGAVASE ERLCIVTEFL PRGSLFQLLQ
601: KDTGKLDPRR KLNMAIDIAR GMNYLHNSIP TIVHRDLKSS NLLVDKNWTV KVADFGLSRL KLETFLTTKG GKGTPQWMAP EVLRSEPSNE KSDVYSYGVV
701: LWELVTHKIP WDTLNPMQII AAVGFMDRRL EIPSNTDPHW ASIIESCWDS DPQRRPSFQE LLERLQDLQK QYVVQARTRR EAAGKGAGKM SPEDC

Best Arabidopsis Sequence Match ( AT1G67890.1 )
(BLAST)

001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.