Factsheet for TraesCS4D01G274400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G245000.3
TraesCS1B01G256200.2
TraesCS1D01G244900.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08720.1	TraesCS1A01G245000.3	AT5G13530.1	21343429
AT1G08720.1	TraesCS1B01G256200.2	AT5G13530.1	21343429
AT1G08720.1	TraesCS1D01G244900.2	AT5G13530.1	21343429

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G029800.1	Wheat	mitochondrion, plastid	91.94	98.22
TraesCS4B01G276200.1	Wheat	mitochondrion, plastid	91.76	98.22
HORVU4Hr1G073290.3	Barley	mitochondrion, plastid	90.19	96.15
Os03t0160100-01	Rice	nucleus	75.83	80.53
EER95467	Sorghum	plastid	72.22	77.61
Zm00001d048430_P002	Maize	cytosol, plastid	70.93	76.98
Zm00001d027743_P002	Maize	cytosol, plastid	71.3	76.85
GSMUA_Achr1P14150_001	Banana	cytosol, plastid	44.81	57.96
GSMUA_Achr2P08840_001	Banana	cytosol, plastid	47.41	56.89
TraesCS1D01G136400.2	Wheat	cytosol, plastid	48.8	54.78
KRH34027	Soybean	cytosol	44.17	51.29
VIT_14s0030g01440.t01	Wine grape	cytosol, plastid	45.83	50.2
CDY22667	Canola	cytosol	39.35	49.65
KRG92780	Soybean	cytosol	44.44	49.38
Solyc01g097980.2.1	Tomato	cytosol, plastid	42.5	46.74
AT1G08720.1	Thale cress	cytosol	40.0	46.3
TraesCS6D01G173100.2	Wheat	mitochondrion	33.89	42.31
Bra031639.1-P	Field mustard	cytosol	38.98	36.42
TraesCS4D01G010200.1	Wheat	plastid	25.09	35.19
TraesCS2D01G424300.1	Wheat	mitochondrion	23.98	33.86
CDY06328	Canola	cytosol	37.41	33.64
TraesCS7D01G191400.1	Wheat	cytosol	32.96	33.46
TraesCS6D01G287700.1	Wheat	cytosol	32.78	31.92
TraesCS3D01G415800.1	Wheat	cytosol	16.67	28.48
TraesCS3D01G415900.2	Wheat	cytosol	18.7	28.17
TraesCS4D01G143700.4	Wheat	cytosol	19.07	27.84
TraesCS6D01G301700.1	Wheat	cytosol	18.52	27.78
TraesCS5D01G097900.1	Wheat	cytosol	18.89	27.09
TraesCS3D01G270900.1	Wheat	cytosol	19.26	26.16
TraesCS5D01G405800.1	Wheat	mitochondrion	18.89	25.66
TraesCS6D01G180500.1	Wheat	cytosol	18.89	23.8
TraesCS5D01G405700.1	Wheat	nucleus	11.85	22.15
TraesCS5D01G407700.1	Wheat	cytosol	12.31	17.14
TraesCS5D01G074400.1	Wheat	cytosol	14.54	13.96
TraesCS7D01G146400.1	Wheat	cytosol, plastid	13.98	13.88
TraesCS6D01G327400.1	Wheat	cytosol	13.33	13.17
TraesCS5D01G560600.1	Wheat	cytosol, plastid	14.54	12.81
TraesCS7D01G500900.1	Wheat	cytosol	12.96	12.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44741	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G274400	EnsemblPlants:TraesCS4D01G274400.2	TIGR:cd13999	SEG:seg

Description

No Description!

Coordinates

chr4D:-:444523318..444531605

Molecular Weight (calculated)

118408.0 Da

IEP (calculated)

7.639

GRAVY (calculated)

-0.538

Length

1080 amino acids

Sequence
(BLAST)

0001: MRQRRSPPQH RVFAVSPPRK RLPARSLAYP ASFPHLPPPR PLSSWRWRRD HDTETRSPLL SRGLRVAEMK NLFKSKIKWQ HRSNDPASSS QPQSSSTSPA
0101: SSPSGTAPAP ALSSAAAMPT ASAPPPSAPV ATTPTAGVGG GGGGGAGGDD YMYSEEEFQM QLAMALSASN SDCAGDRDRD QIRDAKLMSL GGGDRFAAGR
0201: DDGHTADSLS RRYWDYNCLD YHEKVVDGFY DIFDPSMESS RQGKMPSLED LQTGIGDLGF EVIVINRAVD TALQEMEQVA QCILLDFPVA NITLLVQRIA
0301: DLVTDNLGGP VKDANAMLAR WSETSTQLRT SLHTSLLPIG CIKLGLSRHR ALLFKILADS VGIPCKLVKG SNYTGDEDDA VNIIKVDKER EFLVDLMAAP
0401: GALIPADVLS WKGSSSNSNH KLGQKPGLNQ MAGSSSTIYP TLGANALPLE HKGNQLPLLN SGDWISASQS GYEKEAAITH SQTSSSGTPS VTAADVFDGS
0501: WTLVPHTQSD EPSTSAGTSS QHKVVPPGGE HPGAGNIKLS PGHQENTESS NLFAELNPFG RIEPKKASVP FNGPDNRNNE LQRRRENVVP STGRPQQRLV
0601: MKNWSPYNDV SNNKQYNYVQ DSFARRNVGD NVVSSPQVPR SAANNINLNI GARNDGSPVS AHNNDSFMAG SSAMKMPSVA DIGKAAEMAM RGDLSKGTTG
0701: SRLEDQPPFG RHKWGDSTER RVPTNSVQNQ AKERETNFDG KQDHKKLPPD PKKSPLDRFM DVSMPSRNSE SVSPSSARSH RLDCVFDDVS ECEILWEDLV
0801: IGERIGLGSY GEVYRADWNG TEVAVKKFLD QDFYGDALDE FRSEVRIMRR LRHPNIVLFM GAVTRPPNLS IVSEYLPRGS LYKILHRPGC QIDEKRRIKM
0901: AIDVAKGMNC LHTSVPTIVH RDLKSPNLLV DNNWNVKVCD FGLSRLKHST FLSSKSTAGT PEWMAPEVLR NEQSNEKCDV YSFGVILWEL ATLRMPWGGM
1001: NPMQVVGAVG FQDRRLDIPK EIDPLVARII WECWQKDPNL RPSFAQLTTA LKTVQRLVSP SPETQSPPVP QEIWVNSSTP

Best Arabidopsis Sequence Match ( AT1G08720.1 )
(BLAST)

001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ

Arabidopsis Description

EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.