Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G245000.3 | |
| TraesCS1B01G256200.2 | |
| TraesCS1D01G244900.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08720.1 | TraesCS1A01G245000.3 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1B01G256200.2 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1D01G244900.2 | AT5G13530.1 | 21343429 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G276200.1 | Wheat | mitochondrion, plastid | 98.02 | 98.22 |
| HORVU4Hr1G073290.3 | Barley | mitochondrion, plastid | 96.44 | 96.25 |
| TraesCS4D01G274400.2 | Wheat | mitochondrion | 98.22 | 91.94 |
| Os03t0160100-01 | Rice | nucleus | 80.71 | 80.24 |
| EER95467 | Sorghum | plastid | 76.85 | 77.31 |
| Zm00001d048430_P002 | Maize | cytosol, plastid | 75.67 | 76.88 |
| Zm00001d027743_P002 | Maize | cytosol, plastid | 75.96 | 76.65 |
| GSMUA_Achr1P14150_001 | Banana | cytosol, plastid | 47.77 | 57.84 |
| GSMUA_Achr2P08840_001 | Banana | cytosol, plastid | 50.35 | 56.56 |
| TraesCS1A01G131600.1 | Wheat | cytosol | 52.03 | 54.85 |
| KRH34027 | Soybean | cytosol | 46.88 | 50.97 |
| VIT_14s0030g01440.t01 | Wine grape | cytosol, plastid | 49.06 | 50.3 |
| CDY22667 | Canola | cytosol | 42.04 | 49.65 |
| KRG92780 | Soybean | cytosol | 47.28 | 49.18 |
| Solyc01g097980.2.1 | Tomato | cytosol, plastid | 45.6 | 46.95 |
| AT1G08720.1 | Thale cress | cytosol | 42.73 | 46.3 |
| TraesCS6A01G186100.1 | Wheat | mitochondrion | 35.91 | 41.92 |
| Bra031639.1-P | Field mustard | cytosol | 41.64 | 36.42 |
| TraesCS4A01G302000.1 | Wheat | plastid | 26.9 | 35.19 |
| TraesCS2A01G426200.3 | Wheat | cytosol | 25.82 | 34.12 |
| CDY06328 | Canola | cytosol | 39.96 | 33.64 |
| TraesCS7A01G190300.1 | Wheat | cytosol | 35.31 | 33.55 |
| TraesCS6A01G308500.1 | Wheat | cytosol | 35.21 | 32.01 |
| TraesCS3A01G420200.2 | Wheat | cytosol | 17.9 | 31.15 |
| TraesCS5A01G396300.3 | Wheat | nucleus | 20.28 | 28.39 |
| TraesCS3A01G420300.2 | Wheat | cytosol | 19.98 | 28.33 |
| TraesCS4A01G171500.1 | Wheat | cytosol | 20.67 | 27.87 |
| TraesCS6A01G321900.1 | Wheat | cytosol | 19.78 | 27.86 |
| TraesCS5A01G085900.2 | Wheat | cytosol | 20.28 | 27.22 |
| TraesCS3A01G271100.1 | Wheat | cytosol | 20.67 | 26.26 |
| TraesCS6A01G190500.2 | Wheat | cytosol | 20.08 | 25.09 |
| TraesCS5A01G398200.1 | Wheat | cytosol | 13.16 | 17.43 |
| TraesCS5A01G063200.1 | Wheat | cytosol | 15.63 | 14.02 |
| TraesCS6A01G344800.1 | Wheat | cytosol | 14.24 | 13.15 |
| TraesCS7A01G511900.1 | Wheat | cytosol | 13.85 | 12.69 |
| TraesCS7A01G145100.1 | Wheat | cytosol | 15.03 | 11.95 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF14381 | PRINTS:PR00109 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR44741 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS4A01G029800 | EnsemblPlants:TraesCS4A01G029800.1 | TIGR:cd13999 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:21845545..21853969
Molecular Weight (calculated)
110439.0 Da
IEP (calculated)
6.622
GRAVY (calculated)
-0.497
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKNLFKSKIK WQHRSNDASS SQPQSSSTSP ASSPSGTAPA PALSAATPTA SAPSPSAPVA TTPTAGVGGG GGGAAGGDDY MYSEEEFQMQ LAMALSASNS
0101: DCAGDRDRDQ IRDAKLMSLG GGDRFAAGRD DGHTADSLSR RYWDYNCLDY HEKVVDGFYD IFDPSMEASR QGKMPSLEDL QTGIGDLGFE VIVINRAVDT
0201: ALQEMEQVAQ CILLDFPVAN ITLLVQRIAD LVTDNLGGPV KDANAMLARW LETSTQLRTS LHTSLLPIGC IKLGLSRHRA LLFKILADSV GIPCKLVKGS
0301: NYTGDEDDAV NIIKVDKERE FLVDLMAAPG ALIPADVLSW KGSSSNSNHK LGQKPGLNQM AGSSSTIYPT LGANALPLEH KGSQIPLLNS GDWISASQSG
0401: YEKEAAITHS QTSSSGTPSV TAADVFDGSW TLVPHAQSDE PSTSAGTSSQ HKVVPPGGEH PGARNIKLSP GHQENTESNN LFAELNPFGR IEPKKASVPF
0501: NGPDNRNNEL QRRRENVVPS TGRPQQRLVM KNWSPYNDVS NNKQYNYVQD SFARRNVGDN VVSSPQVPRS AANNINLNIG ARNDGSHAVS AHNNDSFMAG
0601: SSAMKMPSVA EIGKAAEMAM RGDLSKGPTG SRLEDQPPFG RHKWGDSTER RVPTNSVQNQ AKEREHNFDG KQDHKKLPPD PKKSPLDRFM DVSMPSRNSE
0701: SVSPSSARSH RLDCVFDDVS ECEILWEDLV IGERIGLGSY GEVYRADWNG TEVAVKKFLD QDFYGDALDE FRSEVRIMRR LRHPNIVLFM GAVTRPPNLS
0801: IVSEYLPRGS LYKILHRPGC QIDEKRRIKM AIDVAKGMNC LHTSVPTIVH RDLKSPNLLV DNNWNVKVCD FGLSRLKHST FLSSKSTAGT PEWMAPEVLR
0901: NEQSNEKCDV YSFGVILWEL ATLRMPWGGM NPMQVVGAVG FQDRRLDIPK EIDPLVARII WECWQKDPNL RPSFAQLTTA LKTVQRLVSP SPAETQSTPV
1001: PQEIWVNSST P
0101: DCAGDRDRDQ IRDAKLMSLG GGDRFAAGRD DGHTADSLSR RYWDYNCLDY HEKVVDGFYD IFDPSMEASR QGKMPSLEDL QTGIGDLGFE VIVINRAVDT
0201: ALQEMEQVAQ CILLDFPVAN ITLLVQRIAD LVTDNLGGPV KDANAMLARW LETSTQLRTS LHTSLLPIGC IKLGLSRHRA LLFKILADSV GIPCKLVKGS
0301: NYTGDEDDAV NIIKVDKERE FLVDLMAAPG ALIPADVLSW KGSSSNSNHK LGQKPGLNQM AGSSSTIYPT LGANALPLEH KGSQIPLLNS GDWISASQSG
0401: YEKEAAITHS QTSSSGTPSV TAADVFDGSW TLVPHAQSDE PSTSAGTSSQ HKVVPPGGEH PGARNIKLSP GHQENTESNN LFAELNPFGR IEPKKASVPF
0501: NGPDNRNNEL QRRRENVVPS TGRPQQRLVM KNWSPYNDVS NNKQYNYVQD SFARRNVGDN VVSSPQVPRS AANNINLNIG ARNDGSHAVS AHNNDSFMAG
0601: SSAMKMPSVA EIGKAAEMAM RGDLSKGPTG SRLEDQPPFG RHKWGDSTER RVPTNSVQNQ AKEREHNFDG KQDHKKLPPD PKKSPLDRFM DVSMPSRNSE
0701: SVSPSSARSH RLDCVFDDVS ECEILWEDLV IGERIGLGSY GEVYRADWNG TEVAVKKFLD QDFYGDALDE FRSEVRIMRR LRHPNIVLFM GAVTRPPNLS
0801: IVSEYLPRGS LYKILHRPGC QIDEKRRIKM AIDVAKGMNC LHTSVPTIVH RDLKSPNLLV DNNWNVKVCD FGLSRLKHST FLSSKSTAGT PEWMAPEVLR
0901: NEQSNEKCDV YSFGVILWEL ATLRMPWGGM NPMQVVGAVG FQDRRLDIPK EIDPLVARII WECWQKDPNL RPSFAQLTTA LKTVQRLVSP SPAETQSTPV
1001: PQEIWVNSST P
001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
Arabidopsis Description
EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.