Factsheet for TraesCS4A01G171500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G156700.4	Wheat	cytosol	98.13	97.87
TraesCS4D01G143700.4	Wheat	cytosol	96.53	97.84
TraesCS4B01G127400.1	Wheat	cytosol	97.33	97.46
HORVU4Hr1G029350.6	Barley	cytosol	94.27	95.41
TraesCS3A01G420200.2	Wheat	cytosol	56.93	73.49
TraesCS6A01G321900.1	Wheat	cytosol	68.8	71.87
TraesCS5A01G396300.3	Wheat	nucleus	68.67	71.33
TraesCS3A01G420300.2	Wheat	cytosol	66.53	69.99
Bra001205.1-P	Field mustard	cytosol	27.6	69.46
EES08966	Sorghum	cytosol	63.73	67.51
CDY57621	Canola	cytosol	26.8	67.45
CDY57623	Canola	cytosol	26.67	64.72
TraesCS5A01G085900.2	Wheat	cytosol	59.47	59.23
GSMUA_Achr3P24310_001	Banana	cytosol	52.93	55.52
GSMUA_Achr5P27150_001	Banana	cytosol	52.27	54.44
GSMUA_Achr11P...	Banana	cytosol	48.93	53.03
GSMUA_Achr8P06350_001	Banana	cytosol	53.73	52.68
KRH36968	Soybean	nucleus	50.67	52.41
KRH50723	Soybean	nucleus	52.67	51.3
Solyc12g099250.1.1	Tomato	cytosol	51.87	50.78
CDY49603	Canola	nucleus	48.67	50.69
KRH02358	Soybean	nucleus	52.0	50.58
PGSC0003DMT400011959	Potato	nucleus	51.73	50.52
Solyc01g059860.2.1	Tomato	cytosol	50.93	50.26
VIT_05s0077g00920.t01	Wine grape	cytosol	51.6	50.19
CDY00031	Canola	cytosol	48.0	49.79
CDY34940	Canola	cytosol	48.27	49.12
CDY34937	Canola	cytosol	48.13	49.12
CDY05282	Canola	cytosol	47.07	48.89
CDY24677	Canola	cytosol	46.53	48.54
CDX74096	Canola	cytosol	40.27	48.17
AT3G06630.2	Thale cress	cytosol	44.8	48.14
AT3G06620.1	Thale cress	cytosol	48.93	47.48
AT1G67890.1	Thale cress	nucleus	48.27	47.32
PGSC0003DMT400061713	Potato	cytosol	51.33	47.18
Bra036141.1-P	Field mustard	cytosol	46.8	46.93
Bra029593.1-P	Field mustard	cytosol	47.2	46.76
Bra040281.1-P	Field mustard	cytosol	48.8	46.74
CDY70084	Canola	nucleus	35.87	46.22
AT3G06640.1	Thale cress	cytosol	44.0	45.21
CDY24676	Canola	cytosol	42.8	44.28
AT5G49470.2	Thale cress	nucleus	47.6	42.96
Bra029594.1-P	Field mustard	cytosol	43.33	42.48
Bra040282.1-P	Field mustard	cytosol	41.47	42.37
CDY05283	Canola	cytosol	42.27	41.55
TraesCS2A01G426200.3	Wheat	cytosol	26.13	25.62
TraesCS4A01G302000.1	Wheat	plastid	26.13	25.36
TraesCS6A01G186100.1	Wheat	mitochondrion	28.53	24.71
TraesCS1A01G131600.1	Wheat	cytosol	28.67	22.42
TraesCS4A01G029800.1	Wheat	mitochondrion, plastid	27.87	20.67
TraesCS7A01G190300.1	Wheat	cytosol	28.0	19.74
TraesCS6A01G308500.1	Wheat	cytosol	28.13	18.97
TraesCS6A01G190500.2	Wheat	cytosol	20.4	18.91
TraesCS3A01G271100.1	Wheat	cytosol	19.2	18.09
TraesCS5A01G398200.1	Wheat	cytosol	17.87	17.56
TraesCS6A01G344800.1	Wheat	cytosol	18.27	12.51
TraesCS5A01G063200.1	Wheat	cytosol	18.8	12.51
TraesCS7A01G511900.1	Wheat	cytosol	17.6	11.97
TraesCS7A01G145100.1	Wheat	cytosol	17.47	10.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:PAS	InterPro:PAS-like_dom_sf	InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714	PRINTS:PR00109
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676	PANTHER:PTHR44676:SF1	InterPro:Prot_kinase_dom
SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TIGRFAMs:TIGR00229	EnsemblPlantsGene:TraesCS4A01G171500	EnsemblPlants:TraesCS4A01G171500.1	TIGR:cd00130	TIGR:cd13999	SEG:seg

Description

No Description!

Coordinates

chr4A:-:434726929..434733669

Molecular Weight (calculated)

83773.4 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.538

Length

750 amino acids

Sequence
(BLAST)

001: MEPDELLRKI RVLEEGQEEL KREIGKLIPG QSSASPPPPP PPRRPFPALQ SLQQATSSRG RALALLHQSP SSSSRPQRPG LSDRHCHRIL QSLGQAVHVI
101: SLEGKVLYWN RFAEHLYGYC SSEAIGQDLL ELICDPCDFS PAHEIIRNIF MGKCWRGKFP VKHKSGERFS VVVNNTPLYD EDGSLVGLTC LSGDARILEE
201: IVGPSVVGKS YPNSAKPHLQ VNNKPRSSLP QKCLSDSQQP LQSAITSKIT NLCILFLISR MTTQATKVTS RVRSRIRSGQ SCDEQDGNGR QGQYSDHDAR
301: EELTSSEAST PGGDVLHGAF VTEEKSLVNS RKTNSDDSGQ GKGGFQKIFS SKAEALLTKK GISWPWKGNE NDGGCGKNNM TSPPLHDKQE NTQIRQGVPV
401: LEPIIIPDSK DTEYAQAGKY EVSGSWWTFN NNSTSSTMSS TVSSNSSPIE RVDYEADCLD YEILWEDLTL GEQVGEGSCG TVYHALWYGS DVAVKVFSRQ
501: EYSEEMIRTF RQEVSLMKKL RHPNIILFMG AVASQERLCI VTEFLPRGSL FRLLRKTTGK LDPRRRVHMA IDIARGMNYL HSSSPTVVHR DLKSSNLLVD
601: KNWTVKVADF GLSRLKIETF LTTKTGKGTP QWMAPEVLRN EPSNEKSDVY SYGVVLWELV TQKIPWDTLN TMQVIGAVGF MDHRLEIPGD IDPQWASMIE
701: SCWDSDPQRR PSFQELLERL RELQKKYGLQ VQMQRSTAGK GAEKMSVDDG

Best Arabidopsis Sequence Match ( AT1G67890.1 )
(BLAST)

001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.