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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX80103
CDX80113
CDY01193
CDY07498
CDY12735
CDY35503
CDY49629
CDY49633
CDY55381
CDY63851
CDY66567
CDY70443

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03730.1 CDY07498 AT1G66340.1 12837948
AT5G03730.1 CDY49629 AT1G66340.1 12837948
AT5G03730.1 CDY49633 AT1G66340.1 12837948
AT5G03730.1 CDY66567 AT1G66340.1 12837948
AT5G03730.1 CDY07498 AT1G66340.1 8417317
AT5G03730.1 CDY49629 AT1G66340.1 8417317
AT5G03730.1 CDY49633 AT1G66340.1 8417317
AT5G03730.1 CDY66567 AT1G66340.1 8417317
AT5G03730.1 CDY07498 AT1G66340.1 9560288
AT5G03730.1 CDY49629 AT1G66340.1 9560288
AT5G03730.1 CDY49633 AT1G66340.1 9560288
AT5G03730.1 CDY66567 AT1G66340.1 9560288
AT5G03730.1 CDX80113 AT2G40940.1 9560288
AT5G03730.1 CDY63851 AT2G40940.1 9560288
AT5G03730.1 CDX80103 AT2G47430.1 9560288
AT5G03730.1 CDY01193 AT2G47430.1 9560288
AT5G03730.1 CDY12735 AT2G47430.1 9560288
AT5G03730.1 CDY55381 AT2G47430.1 9560288
AT5G03730.1 CDY35503 AT3G23150.1 12177468
AT5G03730.1 CDY70443 AT3G23150.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70289 Canola cytosol 98.36 96.52
Bra009514.1-P Field mustard plastid 93.72 90.16
CDX80884 Canola cytosol 93.32 86.15
CDY11267 Canola cytosol 92.91 85.55
AT5G03730.1 Thale cress cytosol 94.0 83.92
PGSC0003DMT400021612 Potato cytosol 67.12 62.12
Solyc09g009090.2.1 Tomato cytosol 70.67 61.89
KRG96132 Soybean cytosol 67.94 61.63
KRH67846 Soybean cytosol 67.94 61.48
Solyc10g085570.1.1 Tomato cytosol 66.03 61.03
KRH20027 Soybean cytosol 69.17 60.65
VIT_08s0007g03910.t01 Wine grape cytosol 70.8 60.63
Solyc10g083610.1.1 Tomato cytosol 68.21 60.31
KRH32650 Soybean cytosol 68.76 60.29
Os09t0566550-01 Rice cytosol, plastid 57.98 56.59
OQU89015 Sorghum cytosol 58.53 56.15
Zm00001d005348_P001 Maize cytosol 58.12 55.4
GSMUA_Achr8P07600_001 Banana cytosol 62.35 54.6
HORVU4Hr1G001850.1 Barley plastid 57.3 54.33
TraesCS4D01G010200.1 Wheat plastid 57.03 54.29
TraesCS4B01G012100.1 Wheat plastid 57.03 54.15
TraesCS4A01G302000.1 Wheat plastid 57.03 54.08
Os02t0527600-01 Rice cytosol 56.89 53.39
GSMUA_Achr11P... Banana cytosol, plastid 56.07 52.96
Zm00001d016675_P001 Maize cytosol, plastid 56.75 52.0
GSMUA_Achr11P... Banana cytosol 56.75 51.94
KXG30326 Sorghum cytosol, plastid 56.75 51.74
CDX91191 Canola extracellular, plasma membrane 6.82 51.02
CDY57621 Canola cytosol 20.19 49.66
CDY57623 Canola cytosol 20.33 48.22
CDY65536 Canola cytosol 45.7 37.06
CDY61011 Canola cytosol 45.57 36.66
CDY22667 Canola cytosol 38.2 32.71
CDY14849 Canola cytosol 22.24 31.96
CDX91190 Canola plastid 37.65 31.01
CDX70425 Canola plastid 36.83 30.75
CDX78447 Canola cytosol, plastid 37.79 30.17
CDY67589 Canola cytosol, plastid 32.88 29.83
CDX94149 Canola cytosol 25.65 29.15
CDY26183 Canola cytosol 39.43 29.1
CDY19193 Canola cytosol 39.15 28.79
CDX88630 Canola cytosol 14.87 28.68
CDX74096 Canola cytosol 24.42 28.55
CDX96491 Canola cytosol 37.52 28.38
CDX72999 Canola cytosol 37.65 28.11
CDX98785 Canola cytosol 27.01 27.16
CDY05282 Canola cytosol 26.6 27.01
CDY24677 Canola cytosol 26.47 26.98
CDY49603 Canola nucleus 26.47 26.94
CDY24676 Canola cytosol 26.47 26.76
CDY34937 Canola cytosol 26.74 26.67
CDY34940 Canola cytosol 26.74 26.59
CDY00031 Canola cytosol 26.06 26.42
CDX97769 Canola cytosol 26.19 25.23
CDY58984 Canola cytosol 26.19 25.23
CDX84808 Canola cytosol 25.78 24.97
CDY23971 Canola cytosol 25.78 24.97
CDY05283 Canola cytosol 25.65 24.64
CDX67756 Canola cytosol 25.65 24.32
CDY70084 Canola nucleus 19.24 24.23
CDX98314 Canola cytosol 25.65 24.16
CDX91799 Canola cytosol, plasma membrane, plastid 16.64 24.02
CDY49240 Canola cytosol 26.47 24.01
CDX71938 Canola cytosol 26.33 23.92
CDY47984 Canola cytosol 18.28 22.95
CDY06328 Canola cytosol 35.61 21.73
CDY68740 Canola cytosol 19.1 16.15
CDY19453 Canola cytosol 18.55 16.02
CDY52846 Canola cytosol 20.33 14.87
CDX93034 Canola cytosol 18.96 14.11
CDY15117 Canola cytosol 18.83 14.04
CDY18251 Canola cytosol 19.24 13.99
CDX89796 Canola cytosol 19.24 13.97
CDX88548 Canola cytosol 20.87 13.97
CDX81758 Canola cytosol 20.74 13.87
CDY35076 Canola cytosol 20.46 13.74
CDY11861 Canola cytosol, plastid 18.83 13.35
CDY33347 Canola cytosol 20.33 13.32
CDX67987 Canola cytosol 20.74 13.14
CDX87374 Canola cytosol 20.6 13.04
CDX79590 Canola cytosol 20.05 12.49
CDY64646 Canola cytosol 19.37 12.46
CDX79328 Canola cytosol 20.87 12.41
CDX84624 Canola cytosol 19.92 12.18
CDY43642 Canola cytosol 19.51 12.17
CDX88629 Canola cytosol, plastid 2.86 6.5
CDX70426 Canola cytosol 0.14 0.32
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.5.2.2MapMan:18.4.1.30Gene3D:3.30.200.20GO:A0A078F764UniProt:A0A078F764EnsemblPlants:CDY10360
ProteinID:CDY10360ProteinID:CDY10360.1InterPro:CTR1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00032260001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714PFAM:PF14381PRINTS:PR00109ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44329PANTHER:PTHR44329:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE5AC5SEG:seg
Description
BnaCnng02610DBnaCnng02610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F764]
Coordinates
chrLK032003:+:32107..37767
Molecular Weight (calculated)
81258.0 Da
IEP (calculated)
5.133
GRAVY (calculated)
-0.265
Length
733 amino acids
Sequence
(BLAST)
001: MEMPGARRSN YTLLSQFPDD QSSLSGDYYV PTLSAAGNEI EMVGFPQDDG GFRLGLGDSR MQMATDSAGG SSSGKSWAQQ TEESYQLQLA LALRLSSEAT
101: CADDPNFLDP VPDESALRTS PSSAETVSHR FWVNGCLSYY DKVPDGFYMI DGLDPYIWTL CIDLNESGRI PSIESLRAID SGVDSSLEAI LVDRRVDPAF
201: KELHNRVHDI SCSCITTKEV VDQLAKLICN RMGGSVIMGE DELVPMWKEC INGLKECFKV VVPIGSLSVG LCRHRALLFK VLADIIDLPC RIAKGCKYCD
301: RDDAASCLVR FGLDREYLVD LVGKPGHLWE PDSLLNGPST ISISSPLRFP RPRPVEPAVD FRELAKQYFT DSESLNLVFD PASDDIGFSM FHRGGENDGS
401: AENGGGSVPP SANMPPQNIM RASNQVQDVV PINAPPINQP VVNRANRDLG LDGDDMDIPW CDLNIKEKIG AGSFGTVHRA EWHGSDVAVK ILMEQDFHAE
501: RVNEFLREVA IMKRLRHPNI VLFMGAVTQP PNLSIVTEYL SRGSLFRLLH KSGAREQLDE RRRLSMAYDV AKGMNYLHNR NPPIVHRDLK SPNLLVDKKY
601: TVKVCDFGLS RLKASTFLSS KSAAGTPEWM APEVLRDEQS NEKSDVYSFG VILWELATLQ QPWGNLNPAQ VVAAVGFKNK RLEIPRNLNP QVAAIIEGCW
701: TNEPWKRPSF ATIMDLLRPL IKSAVPPPNR LDL
Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)
001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L
Arabidopsis Description
CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.