CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91030
EER94128
EES06508
EES10426
EES19059
KXG19481
KXG26059
KXG36402
OQU85974

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03730.1	EER91030	AT2G40940.1	9560288
AT5G03730.1	EES19059	AT2G40940.1	9560288
AT5G03730.1	EER94128	AT2G47430.1	9560288
AT5G03730.1	KXG19481	AT2G47430.1	9560288
AT5G03730.1	KXG26059	AT2G47430.1	9560288
AT5G03730.1	EES06508	AT3G23150.1	12177468
AT5G03730.1	EES10426	AT3G23150.1	12177468
AT5G03730.1	KXG36402	AT3G23150.1	12177468
AT5G03730.1	OQU85974	AT3G23150.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016675_P001	Maize	cytosol, plastid	92.41	92.88
Os02t0527600-01	Rice	cytosol	77.86	80.15
OQU89015	Sorghum	cytosol	54.1	56.94
CDY10360	Canola	cytosol	51.74	56.75
CDX70289	Canola	cytosol	51.99	55.96
KRH71740	Soybean	cytosol	45.4	55.3
CDX80884	Canola	cytosol	53.86	54.53
VIT_13s0074g00430.t01	Wine grape	cytosol	51.37	54.49
Bra005778.1-P	Field mustard	cytosol	53.73	54.34
CDY11267	Canola	cytosol	53.73	54.27
Solyc09g009090.2.1	Tomato	cytosol	56.09	53.88
AT5G03730.1	Thale cress	cytosol	54.85	53.72
KRG96132	Soybean	cytosol	53.86	53.59
PGSC0003DMT400021612	Potato	cytosol	52.74	53.54
KRH20027	Soybean	cytosol	55.47	53.35
KRH32650	Soybean	cytosol	55.47	53.35
KRH67846	Soybean	cytosol	53.36	52.96
Bra009514.1-P	Field mustard	plastid	50.0	52.76
Solyc10g085570.1.1	Tomato	cytosol	51.87	52.59
VIT_08s0007g03910.t01	Wine grape	cytosol	55.35	51.99
Solyc10g083610.1.1	Tomato	cytosol	52.99	51.39
KRH33179	Soybean	cytosol	24.13	50.92
OQU82304	Sorghum	cytosol, mitochondrion, peroxisome, plastid	38.81	39.34
OQU84648	Sorghum	mitochondrion	33.58	30.75
KXG38479	Sorghum	cytosol, plastid	33.83	28.19
EES08966	Sorghum	cytosol	24.13	27.4
EER95467	Sorghum	plastid	34.2	27.36
EES16163	Sorghum	cytosol	25.37	26.98
KXG19659	Sorghum	cytosol, plastid	33.58	24.93
EES07274	Sorghum	cytosol	33.58	24.02
EES04829	Sorghum	cytosol	23.26	23.7
EES03424	Sorghum	cytosol	23.26	23.61
KXG34260	Sorghum	cytosol	17.79	16.63
OQU79487	Sorghum	cytosol	18.78	13.93
OQU90262	Sorghum	cytosol	16.92	13.65
KXG20486	Sorghum	cytosol	17.66	12.76
EER93053	Sorghum	cytosol	19.4	12.72
EES17730	Sorghum	cytosol	19.53	12.38
KXG31236	Sorghum	cytosol	17.04	12.38
OQU75963	Sorghum	cytosol	15.3	11.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.5.2.2	MapMan:18.4.1.30	Gene3D:3.30.200.20	UniProt:A0A194YR70	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	ProteinID:KXG30324.1	ProteinID:KXG30325.1	EnsemblPlants:KXG30326	ProteinID:KXG30326
ProteinID:KXG30326.1	InterPro:Kinase-like_dom_sf	ProteinID:OQU85045.1	ProteinID:OQU85046.1	PFAM:PF07714	PFAM:PF14381
PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329	PANTHER:PTHR44329:SF3
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G163300	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0007F20B39	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:51258806..51266064

Molecular Weight (calculated)

87467.3 Da

IEP (calculated)

6.473

GRAVY (calculated)

-0.300

Length

804 amino acids

Sequence
(BLAST)

001: MMKDAKWPHA AASVGGRRGP GPSAASSSSA AGPSYTLLAS SPPTTASNDG CSPHYPPAPA SDDDGPSSFD ASVAAAKLPF QHQPHRNSPQ LGVADWLRLQ
101: RQSSGSSVGA DDGEVSSTVS STLANAAEYR DNKGDADRPP SSSSKSWAQQ AEEAYHLQLA LALRLCSEAS SATDPNFLDS STAAAADHLQ HIASPQSLSH
201: RFWVNGSLSY SDKVPDGFYL IQGMDPFIWT LCNDVHDGGR VPSIESLKAV NPTDSAIEVV IVDKVADYDL RQLISMAIDV SRNRADSKEI ATRLAAVVST
301: KMGGSLAATE EHELGPRWRD SVGFLKISSG SVVLPIGKLS IGFCCHRALL FKTLADSINL PCRIVKGCKY CKAGAANSCL VRFGHDREYL IDLIGNPGFL
401: SEPDSLLNGL SSISVSSPLR PPKHDSADIS DNFKLLAKQY FRDCQSLNLM FSDPAAGTVI DLDEAMGSNL GPNSSHATNS DCQATFKAGT QRGSQDGNFI
501: MQRSSPEDTQ SGLSDPFSDM SLEIEDLIIP WSELVLKEKI GAGSFGTVHR ADWNDSDVAV KILMEQDFHP ERLKEFLREV AIMRSLRHPN IVLLMGAVTQ
601: PPNLSIVTEY LSRGSLYRLL HRHGARENLD ERRRLSMAFD VAKGMNYLHK RNPPIVHRDL KSPNLLVDKK YTVKVCDFGL SRLKANTFLS SKTAAGTPEW
701: MAPEVLRDEP SNEKSDVYSF GVILWEIMTL QQPWSNLNPA QVVAAVGFKG RRLDIPSSVD PKVAAVIESC WAREPWRRPS FASIMESLKP LIKTLPPNQL
801: LEEN

Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)

001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L

Arabidopsis Description

CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.