Factsheet for GSMUA_Achr3P22920_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...	plasma membrane, plasma membrane
GSMUA_Achr7P14570_001	plasma membrane, plasma membrane
GSMUA_Achr7P14620_001	plasma membrane, plasma membrane
GSMUA_Achr8P07600_001
GSMUA_AchrUn_...	plasma membrane, plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	GSMUA_Achr11P...	AT3G21510.1	21569135
AT2G47430.1	GSMUA_Achr7P14570_001	AT3G21510.1	21569135
AT2G47430.1	GSMUA_Achr7P14620_001	AT3G21510.1	21569135
AT2G47430.1	GSMUA_AchrUn_...	AT3G21510.1	21569135
AT2G47430.1	GSMUA_Achr11P...	AT3G29350.1	10930573
AT2G47430.1	GSMUA_Achr7P14570_001	AT3G29350.1	10930573
AT2G47430.1	GSMUA_Achr7P14620_001	AT3G29350.1	10930573
AT2G47430.1	GSMUA_AchrUn_...	AT3G29350.1	10930573
AT2G47430.1	GSMUA_Achr11P...	AT3G29350.1	21569135
AT2G47430.1	GSMUA_Achr7P14570_001	AT3G29350.1	21569135
AT2G47430.1	GSMUA_Achr7P14620_001	AT3G29350.1	21569135
AT2G47430.1	GSMUA_AchrUn_...	AT3G29350.1	21569135
AT2G47430.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G47430.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G47430.1	GSMUA_Achr8P07600_001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94128	Sorghum	extracellular, plasma membrane	31.35	40.51
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	30.62	40.0
TraesCS4A01G340900.1	Wheat	endoplasmic reticulum, golgi	29.69	38.83
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	29.27	38.28
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	20.62	34.98
Os06t0183200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	36.77	33.68
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	25.94	33.65
Zm00001d035846_P001	Maize	extracellular	36.15	33.49
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	26.67	33.42
TraesCS7D01G148400.1	Wheat	endoplasmic reticulum, plasma membrane	31.88	33.37
KXG19481	Sorghum	plasma membrane	36.98	32.54
TraesCS7D01G148100.1	Wheat	plasma membrane	36.46	32.35
TraesCS7D01G148700.1	Wheat	peroxisome, plasma membrane, plastid	32.4	32.29
TraesCS7A01G146600.1	Wheat	plasma membrane	36.15	32.1
TraesCS7B01G049100.1	Wheat	plasma membrane	36.46	31.73
TraesCS7B01G049400.1	Wheat	plasma membrane	33.75	31.0
VIT_07s0005g01380.t01	Wine grape	plasma membrane	33.33	29.25
KRH68254	Soybean	cytosol	31.77	28.88
HORVU7Hr1G030040.2	Barley	extracellular	30.31	28.12
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	29.9	27.62
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	29.79	26.78
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	29.69	26.76
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	29.48	25.43
AT2G47430.1	Thale cress	plasma membrane	29.69	25.4
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	29.17	24.52
GSMUA_Achr5P00120_001	Banana	cytosol	7.92	21.23
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	18.02	20.4
GSMUA_Achr10P...	Banana	cytosol	17.6	19.14
GSMUA_Achr7P11260_001	Banana	mitochondrion	18.02	18.99
GSMUA_Achr4P17470_001	Banana	cytosol	14.9	18.45
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	19.06	18.34
GSMUA_Achr4P15980_001	Banana	cytosol	18.65	17.94
GSMUA_AchrUn_...	Banana	cytosol	17.6	17.75
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	18.02	17.74
GSMUA_Achr1P23390_001	Banana	cytosol	15.31	16.82
GSMUA_Achr1P22740_001	Banana	cytosol	14.06	16.58
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	8.96	14.9
GSMUA_Achr11P...	Banana	cytosol	9.69	14.65
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	8.54	12.58
GSMUA_Achr11P...	Banana	plasma membrane	9.69	12.27
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	9.27	11.76
GSMUA_Achr7P26840_001	Banana	plasma membrane	7.81	11.31
GSMUA_Achr11P...	Banana	cytosol	2.71	7.07

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr3G22920_001	EnsemblPlants:GSMUA_Achr3P22920_001
EnsemblPlants:GSMUA_Achr3T22920_001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom
InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	UniProt:M0SH08	PFAM:PF00072	PFAM:PF00512
PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43719	SMART:SM00387
SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C
InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0002953820	SEG:seg	:	:

Description

Putative Histidine kinase CKI1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22920_001]

Coordinates

chr3:-:23765387..23769402

Molecular Weight (calculated)

108042.0 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.192

Length

960 amino acids

Sequence
(BLAST)

001: MNLLCLQIVP QLYVPFLMEQ WVAQISYIEP RGILFSYYRD GNQSYNLFSN VSNTSDDFFA YSWCTQALDG ETGKPYGKIV CFQPGQSNDS KGASSGRKGE
101: ASWGVGWGNA KEQMLLFTAP VAKSGILSLG VPLRSLRDSI SRINLQGGCF HLAVEGHIIA QNGPPHTHFV YNNSMMSVLV MDENDTNVLK EYDSFACHDN
201: TSIRPSNTNY LWISGKRYQL DCFLLNVSGV QLVYTVTLPD KEVVPLFQKT KIAIVLLVLF MILGTILGSY VMLQLLQRAQ LHETFLRADL IKQKGIIQQA
301: ERKSMNKSLA FASASHDIRT SLAGITGLIE ICRSDTPQNS ELSRNLEQMN GCVSKLLGIL NSVLDISKIE AGKMQLEEIE FDIAQVLEES VDIFHVVALK
401: KGLEVIWDPC DCSILLSSNV KGDCRRLKQI IDNLLGNAVK FTSEGHVVLH QSLIQNDNSL IEIVIEVDDT GMGIPKEKRA SVFENYVQVK ESSNRDYEGT
501: GLGLGIVQSY VRLMGGEIKI QDKDPSEPGT CFRFNIFLKS SDSEGEEKDE KSSILCIESS TQIIQSNART LAFRRGLSIE GIHSLLMVEG DETKRIMQRW
601: MQNLGVKVWT INHRELLYPT LEKIKDNFNI SGKFDTKSLV NFLNMTASYK SSKEKEDIEM DNVLPSTNKE FKNSSGGLSI YWLIVVELIH ANFSEIASAL
701: KNFTDKIPRS HYKIVWLLNS NAPGEDLRRS KEVPCDLILQ KPIHGSRLYL LLRLLQNFGR ENEDLILDER QQYGESNSFM ESDKFVVNSS ILRSNQHANQ
801: IFGSKNSLKD EKPLKGMNIL LVEDVSTLRH VATTMLARLG ATIKSSENGL DALNLIRDAL KELSPAHERD TEMGESKRFY YDVIIMDCEM PIMNGYEATR
901: QIRQEERNYD LHIPIIALTA HATSEEENKS ILSGMDFHLT KPIQARELIH AITTISLLIL

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.