Factsheet for GSMUA_Achr8P14350_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 7
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P07600_001
GSMUA_Achr8P14350_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04310.1	GSMUA_Achr11P...	AT1G04310.1	18577522
AT1G04310.1	GSMUA_Achr8P14350_001	AT1G04310.1	18577522
AT1G04310.1	GSMUA_AchrUn_...	AT1G04310.1	18577522
AT3G23150.1	GSMUA_Achr11P...	AT5G03730.1	12177468
AT3G23150.1	GSMUA_Achr11P...	AT5G03730.1	12177468
AT3G23150.1	GSMUA_Achr8P07600_001	AT5G03730.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	87.32	87.2
EES10426	Sorghum	plasma membrane	63.8	62.48
Zm00001d004372_P003	Maize	plasma membrane	62.88	61.82
Os04t0169100-02	Rice	plasma membrane	62.22	61.73
TraesCS2B01G023800.1	Wheat	plasma membrane	62.35	61.38
TraesCS2D01G000500.1	Wheat	plasma membrane	62.88	61.34
TraesCS2A01G000200.1	Wheat	plasma membrane	62.75	61.05
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	62.22	60.62
HORVU2Hr1G000030.1	Barley	plasma membrane	61.96	60.52
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	63.01	59.33
VIT_14s0081g00630.t01	Wine grape	plasma membrane	59.18	58.95
VIT_05s0049g00090.t01	Wine grape	plasma membrane	58.52	57.98
PGSC0003DMT400073847	Potato	plasma membrane	56.27	55.54
Solyc11g006180.1.1	Tomato	plasma membrane	56.27	55.54
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.82	55.52
Solyc06g036450.1.1	Tomato	cytosol	7.27	55.0
OQU85974	Sorghum	plasma membrane	56.27	54.9
Solyc06g051610.1.1	Tomato	cytosol	12.02	54.82
PGSC0003DMT400041983	Potato	plasma membrane	55.09	54.8
Solyc06g053710.2.1	Tomato	plasma membrane	54.95	54.66
Solyc05g055070.2.1	Tomato	plasma membrane	53.76	54.63
PGSC0003DMT400060160	Potato	endoplasmic reticulum	54.95	54.52
Zm00001d051889_P002	Maize	endoplasmic reticulum	54.29	54.51
TraesCS6B01G439600.1	Wheat	mitochondrion	56.01	54.08
TraesCS6D01G383600.1	Wheat	mitochondrion	55.75	53.83
TraesCS6A01G399400.2	Wheat	mitochondrion, plasma membrane	56.01	52.41
Solyc11g065590.1.1	Tomato	cytosol	6.21	52.22
HORVU6Hr1G080170.1	Barley	plasma membrane	12.95	52.13
Solyc12g044870.1.1	Tomato	cytosol	11.23	51.2
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	55.48	51.09
CDY35503	Canola	plasma membrane	52.18	50.71
Os02t0820900-03	Rice	mitochondrion	55.75	50.48
AT3G04580.1	Thale cress	plasma membrane	50.99	50.39
CDY70443	Canola	plasma membrane	51.92	50.38
Bra040134.1-P	Field mustard	plasma membrane	50.86	50.26
Bra023756.1-P	Field mustard	plasma membrane	51.78	50.26
CDY30004	Canola	plasma membrane	50.73	50.13
Solyc09g082910.1.1	Tomato	cytosol	10.96	50.0
AT3G23150.1	Thale cress	endoplasmic reticulum, plasma membrane	50.59	49.55
Solyc04g049990.1.1	Tomato	cytosol	8.45	48.85
PGSC0003DMT400044244	Potato	plasma membrane	48.35	48.61
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	47.16	47.35
TraesCS6A01G329400.1	Wheat	plasma membrane	45.31	46.99
TraesCS6D01G308300.1	Wheat	plasma membrane	45.18	46.98
TraesCS6B01G360200.1	Wheat	cytosol, endoplasmic reticulum, golgi	44.65	46.43
HORVU6Hr1G080180.1	Barley	cytosol	30.38	45.73
KRH31729	Soybean	endoplasmic reticulum	14.4	45.61
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	6.61	45.45
Solyc09g011680.1.1	Tomato	cytosol	6.21	45.19
Bra015303.1-P	Field mustard	endoplasmic reticulum	36.72	45.13
CDY67999	Canola	plasma membrane	36.86	45.07
CDX86641	Canola	endoplasmic reticulum	35.4	45.04
CDY70681	Canola	endoplasmic reticulum	36.59	44.89
GSMUA_Achr11P...	Banana	cytosol	21.8	44.84
Solyc01g014770.1.1	Tomato	cytosol	7.93	44.78
CDY64702	Canola	mitochondrion	7.66	44.27
Solyc04g025660.1.1	Tomato	cytosol	6.08	44.23
TraesCS6D01G266200.1	Wheat	plasma membrane	42.01	43.8
TraesCS6A01G285800.1	Wheat	plasma membrane	41.88	43.54
AT1G04310.1	Thale cress	endoplasmic reticulum	36.86	43.26
TraesCS6B01G314600.1	Wheat	plasma membrane	41.22	42.8
HORVU6Hr1G071860.2	Barley	plasma membrane	40.29	42.24
Os07t0259100-01	Rice	mitochondrion, plasma membrane	43.33	42.21
Solyc12g062760.1.1	Tomato	cytosol	4.89	42.05
GSMUA_Achr7P26840_001	Banana	plasma membrane	35.53	40.57
Solyc08g068360.1.1	Tomato	cytosol	6.21	39.17
Solyc12g038690.1.1	Tomato	cytosol	3.3	39.06
Zm00001d053594_P001	Maize	plasma membrane	41.35	38.98
EES06508	Sorghum	mitochondrion, plasma membrane	42.14	38.57
CDY21123	Canola	cytosol	15.19	38.33
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	8.98	37.57
Solyc09g065310.1.1	Tomato	cytosol	3.17	37.5
GSMUA_Achr11P...	Banana	cytosol	30.78	36.69
KXG36402	Sorghum	plasma membrane	41.35	36.61
Zm00001d021687_P001	Maize	plasma membrane	40.03	35.44
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.29	34.49
Solyc12g027610.1.1	Tomato	cytosol	8.72	33.85
GSMUA_Achr5P00120_001	Banana	cytosol	13.74	29.05
Bra030564.1-P	Field mustard	plasma membrane	40.03	18.0
CDY15498	Canola	plasma membrane	40.42	17.89
GSMUA_Achr1P23390_001	Banana	cytosol	16.38	14.19
GSMUA_Achr4P17470_001	Banana	cytosol	13.74	13.42
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	17.04	13.23
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	14.8	13.21
GSMUA_AchrUn_...	Banana	cytosol	16.38	13.03
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	16.78	12.73
GSMUA_Achr10P...	Banana	cytosol	14.66	12.57
GSMUA_Achr4P15980_001	Banana	cytosol	16.51	12.53
GSMUA_Achr7P11260_001	Banana	mitochondrion	14.53	12.07
GSMUA_Achr1P22740_001	Banana	cytosol	12.95	12.04
GSMUA_Achr3P22920_001	Banana	extracellular	11.76	9.27

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily
ncoils:Coil	InterPro:ETR	InterPro:GAF	InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673	GO:GO:0004871	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009873	GO:GO:0009987	GO:GO:0010105	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018106	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	GO:GO:0038199	GO:GO:0046872	GO:GO:0050896	GO:GO:0051740
EnsemblPlantsGene:GSMUA_Achr8G14350_001	EnsemblPlants:GSMUA_Achr8P14350_001	EnsemblPlants:GSMUA_Achr8T14350_001	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890	UniProt:M0TQD8
PFAM:PF00072	PFAM:PF00512	PFAM:PF01590	PIRSF:PIRSF026389	PFscan:PS50109	PFscan:PS50110
PANTHER:PTHR43719	PANTHER:PTHR43719:SF6	SMART:SM00065	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55781	InterPro:Sig_transdc_resp-reg_receiver	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000295DE44
SEG:seg	:	:	:	:	:

Description

Putative Protein EIN4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14350_001]

Coordinates

chr8:-:11050651..11054339

Molecular Weight (calculated)

84979.7 Da

IEP (calculated)

8.253

GRAVY (calculated)

0.012

Length

757 amino acids

Sequence
(BLAST)

001: MLRALFHGLL ISSILLSASA TGIGYSRCNC DGDSFWNVEN IFQCQKASDF LIAAAYFSIP LELLYFATCS DLFPFKWIVF QFGAFIVLCG LTHLLNVFTY
101: EQHSFLLMLS LTVSKFFTAL VSFATAITLL TLIPQLLRVK VRENFLRLKA RELNREVGMM KMQEEASWHV RMLTQEIRKS LDRHTILYTT MVELSKTLGL
201: QNCVVWMPDE NKKEMQLTHQ LRQRSSSDLY SRSISIDDPD ILEIKETKGV KILGTGSVLG SASSGGMLES GAVAATRMPM LKVSNFKGGT PEDVQASYAL
301: LVLVLPRDAS RVWSHQELEI VEVVADQVAV ALSHAAVLEE SQLMREKLVR QNRDLLQARQ NTVRASEARN KFQVAMSQGM RRPIHSILGL LSMMQQDKLS
401: PEQRLIIDTI TKSSSVVSTL VNDVMEISTV NSERVSLVMR PFHLHSMIKE AITAARCLCD FRRFGFSFQV ENEVPDQVVG DEKRIFHVIL HMVGTVLNGC
501: DEGSLMFRVM GYQGVSDKED QAWVPWKSNF SDGYACVKFE VRLKGSETDK LSSSTVQSSR VPDSQGLEMG LTFRMFKRLV QMMQGNIWEA KTLQGQSESI
601: TLALQFQLQR LMAMPEARGS FELQSTSATP NFKGLRVLLA ETDGINRAVT RKLLEKLGCH VSSVASGIQC LNSYGAPVTP FQLIMLDLHM PQTDAFEVAT
701: RIRKFRSRSW PLIVGLTASA EGDIWEKCLQ SGMNGLIRKP VTLQSMGDEL YRVLQNS

Best Arabidopsis Sequence Match ( AT3G04580.2 )
(BLAST)

001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE

Arabidopsis Description

EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.