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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc06g053710.2.1
Solyc07g056580.2.1
Solyc09g009090.2.1
Solyc09g089610.2.1
Solyc10g083610.1.1
Solyc10g085570.1.1
Solyc12g011330.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 Solyc06g053710.2.1 AT1G04310.1 18577522
AT1G04310.1 Solyc09g089610.2.1 AT1G04310.1 18577522
AT1G04310.1 Solyc07g056580.2.1 AT1G66340.1 18577522
AT1G04310.1 Solyc12g011330.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc07g056580.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc12g011330.2.1 AT1G66340.1 18577522
AT3G23150.1 Solyc09g009090.2.1 AT5G03730.1 12177468
AT3G23150.1 Solyc10g083610.1.1 AT5G03730.1 12177468
AT3G23150.1 Solyc10g085570.1.1 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041983 Potato plasma membrane 98.29 98.29
VIT_05s0049g00090.t01 Wine grape plasma membrane 70.7 70.42
KRG90373 Soybean plasma membrane 42.05 70.02
KRH34517 Soybean plasma membrane 62.68 64.72
KRG92290 Soybean plasma membrane 64.39 64.3
Solyc09g089610.2.1 Tomato endoplasmic reticulum 60.58 61.14
CDY35503 Canola plasma membrane 60.05 58.66
Bra023756.1-P Field mustard plasma membrane 59.92 58.46
CDY70443 Canola plasma membrane 59.92 58.46
Solyc06g051610.1.1 Tomato cytosol 12.75 58.43
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 58.21 57.31
Solyc11g006180.1.1 Tomato plasma membrane 57.69 57.24
GSMUA_Achr11P... Banana plasma membrane 56.64 56.86
Solyc05g055070.2.1 Tomato plasma membrane 55.19 56.38
Solyc11g065590.1.1 Tomato cytosol 6.57 55.56
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 54.66 54.95
Solyc12g044870.1.1 Tomato cytosol 11.83 54.22
KRG90374 Soybean cytosol 15.9 54.02
Solyc06g036450.1.1 Tomato cytosol 7.1 54.0
Solyc09g082910.1.1 Tomato cytosol 11.7 53.61
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 7.49 51.82
Solyc12g038690.1.1 Tomato cytosol 4.34 51.56
Solyc09g065310.1.1 Tomato cytosol 4.34 51.56
Solyc04g049990.1.1 Tomato cytosol 8.8 51.15
Solyc12g062760.1.1 Tomato cytosol 5.91 51.14
Solyc09g011680.1.1 Tomato cytosol 6.96 50.96
Solyc04g025660.1.1 Tomato cytosol 6.96 50.96
TraesCS2B01G023800.1 Wheat plasma membrane 50.59 50.06
TraesCS2D01G000500.1 Wheat plasma membrane 50.99 50.0
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 42.84 50.0
Os04t0169100-02 Rice plasma membrane 50.07 49.93
Zm00001d051889_P002 Maize endoplasmic reticulum 49.41 49.87
TraesCS2A01G000200.1 Wheat plasma membrane 50.85 49.74
CDY67999 Canola plasma membrane 40.34 49.6
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 50.59 49.55
Bra015303.1-P Field mustard endoplasmic reticulum 40.08 49.51
EES10426 Sorghum plasma membrane 50.07 49.29
HORVU2Hr1G000030.1 Barley plasma membrane 50.07 49.16
TraesCS6B01G439600.1 Wheat mitochondrion 50.59 49.11
OQU85974 Sorghum plasma membrane 50.07 49.1
CDX86641 Canola endoplasmic reticulum 38.37 49.08
TraesCS6D01G383600.1 Wheat mitochondrion 50.33 48.85
CDY70681 Canola endoplasmic reticulum 39.55 48.78
Zm00001d004372_P003 Maize plasma membrane 49.15 48.57
Solyc01g014770.1.1 Tomato cytosol 8.54 48.51
AT1G04310.1 Thale cress endoplasmic reticulum 40.87 48.22
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 50.2 47.22
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 49.41 46.77
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 50.07 46.35
HORVU6Hr1G080170.1 Barley plasma membrane 11.3 45.74
Os02t0820900-03 Rice mitochondrion 49.41 44.98
Solyc08g068360.1.1 Tomato cytosol 6.96 44.17
Solyc04g064840.1.1 Tomato endoplasmic reticulum 9.99 41.99
TraesCS6D01G266200.1 Wheat plasma membrane 39.82 41.74
TraesCS6A01G285800.1 Wheat plasma membrane 39.55 41.35
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 39.29 41.07
TraesCS6B01G314600.1 Wheat plasma membrane 39.29 41.02
TraesCS6A01G329400.1 Wheat plasma membrane 39.03 40.68
HORVU6Hr1G071860.2 Barley plasma membrane 38.5 40.58
Solyc12g027610.1.1 Tomato cytosol 10.38 40.51
TraesCS6D01G308300.1 Wheat plasma membrane 38.5 40.25
HORVU6Hr1G080180.1 Barley cytosol 25.76 38.97
Os07t0259100-01 Rice mitochondrion, plasma membrane 39.42 38.61
Solyc12g011330.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 38.11 38.46
Solyc07g056580.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 36.79 38.04
Solyc09g075440.2.1 Tomato plasma membrane 30.35 36.38
Zm00001d053594_P001 Maize plasma membrane 38.37 36.36
EES06508 Sorghum mitochondrion, plasma membrane 38.37 35.31
KXG36402 Sorghum plasma membrane 37.06 32.98
Zm00001d021687_P001 Maize plasma membrane 36.4 32.4
Solyc02g083670.2.1 Tomato cytosol 3.15 32.0
Bra030564.1-P Field mustard plasma membrane 43.89 19.85
CDY15498 Canola plasma membrane 44.15 19.65
Solyc04g008110.2.1 Tomato plasma membrane 19.84 15.21
Solyc05g015610.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 19.32 14.24
Solyc07g047770.2.1 Tomato golgi 19.71 12.15
Solyc08g068960.2.1 Tomato cytosol 15.11 11.3
Solyc02g083680.1.1 Tomato plastid 11.43 9.9
Solyc12g099720.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 9.59 9.86
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300ProteinID:AAU34076.1
EMBL:AF118843InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sf
GO:GO:0000155GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673
GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009873GO:GO:0009987
GO:GO:0010105GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0018106GO:GO:0019538GO:GO:0023014GO:GO:0038023GO:GO:0038199GO:GO:0046872
GO:GO:0050896GO:GO:0051740InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sf
InterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890PFAM:PF00072
PFAM:PF00512PFAM:PF01590PFAM:PF02518PIRSF:PIRSF026389PFscan:PS50109PFscan:PS50110
PANTHER:PTHR43719PANTHER:PTHR43719:SF6UniProt:Q9XET8SMART:SM00065SMART:SM00388SMART:SM00448
SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-TM
EnsemblPlantsGene:Solyc06g053710.2EnsemblPlants:Solyc06g053710.2.1TMHMM:TMhelixUniParc:UPI00000A3CC5SEG:seg:
Description
Ethylene receptor [Source:UniProtKB/TrEMBL;Acc:Q9XET8]
Coordinates
chr6:-:36553957..36557294
Molecular Weight (calculated)
85139.9 Da
IEP (calculated)
7.147
GRAVY (calculated)
0.037
Length
761 amino acids
Sequence
(BLAST)
001: MLRTLASALL VLSFFVSLSA ADNGFPRCNC DDEGFWSIES ILECQKISDL FIAIAYFSIP IELLYFVSCS NFPFKWVLFQ FIAFIVLCGM THLLNFWTYY
101: GQHPFQLMLA LTIFKVLTAL VSFATAITLI TLFPMLLKVK VREFMLKKKT WDLGREVGLI KMQKEAGWHV RMLTQEIRKS LDRHTILYTT LVELSKTLDL
201: HNCAVWKPNE NKTEMNLIHE LRDSSFNSAY NLPIPRSDPD VIQVKESDGV KILDADSPLA VASSGGSREP GAVAAIRMPM LKVSNFKGGT PELVPECYAI
301: LVLVLPSEQG RSWCSQEIEI VRVVADQVAV ALSHAAILEE SQHMRETLEE QNRALEQAKQ DALRASQARN AFQMVMSHGL RRPMHSILGL LSLLQDEKLG
401: NEQRLLVDSM VKTSNVVSTL IDDVMDTSTK DNGRFPLEMR YFQLHSMIKE AACLAKCLCA YRGYNISIEV DKSLPNHVLG DERRVFQVIL HMVGNLLKDP
501: NGGLLTFRVL PESVSREGIG GAWRTRRSNS SRDNAYIRFE VGTSNNHSQP EGTMLPHYRP KRCSKEMDEG LSFTVCRKLV QLMQGDIWVI PNPEGFDQSM
601: AVVLGLQLRP SIAIGIPEYG ESSDHSHPHS LLQGVKVLLA DYDDVNRAVT SKLLEKLGCS VSAVSSGRDC IGVLSPAVSS FQIVLLDLHL PDLDGFEVTM
701: RIRKFGSHNW PLIVGLTATA DENVTGRCLQ IGMNGLIRKP VLLPGIADEL QRVLLRGSRM M
Best Arabidopsis Sequence Match ( AT3G04580.2 )
(BLAST)
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Arabidopsis Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.