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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • mitochondrion 4
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G000200.1
TraesCS2B01G023800.1
TraesCS2D01G000500.1
TraesCS4A01G302000.1
TraesCS4B01G012100.1
TraesCS4D01G010200.1
TraesCS6A01G285800.1
TraesCS6A01G329400.1
TraesCS6A01G399400.2
TraesCS6B01G314600.1
TraesCS6B01G360200.1
TraesCS6B01G439600.1
TraesCS6D01G266200.1
TraesCS6D01G308300.1
TraesCS6D01G383600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 TraesCS2A01G000200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2B01G023800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2D01G000500.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G285800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G329400.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G399400.2 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G314600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G360200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G439600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G266200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G308300.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G383600.1 AT1G04310.1 18577522
AT3G23150.1 TraesCS4A01G302000.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4B01G012100.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4D01G010200.1 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G439600.1 Wheat mitochondrion 95.67 98.72
TraesCS6D01G383600.1 Wheat mitochondrion 94.56 97.58
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 96.66 95.13
OQU85974 Sorghum plasma membrane 76.39 79.64
Zm00001d051889_P002 Maize endoplasmic reticulum 72.19 77.45
Os02t0820900-03 Rice mitochondrion 77.87 75.36
GSMUA_Achr11P... Banana plasma membrane 53.65 57.26
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 52.41 56.01
Solyc06g051610.1.1 Tomato cytosol 10.75 52.41
VIT_14s0081g00630.t01 Wine grape plasma membrane 48.83 51.97
VIT_05s0049g00090.t01 Wine grape plasma membrane 49.07 51.96
TraesCS2A01G000200.1 Wheat plasma membrane 49.57 51.54
Solyc11g006180.1.1 Tomato plasma membrane 47.71 50.33
Solyc06g053710.2.1 Tomato plasma membrane 47.22 50.2
PGSC0003DMT400073847 Potato plasma membrane 47.59 50.2
Solyc05g055070.2.1 Tomato plasma membrane 45.74 49.66
PGSC0003DMT400041983 Potato plasma membrane 46.6 49.54
PGSC0003DMT400060160 Potato endoplasmic reticulum 46.6 49.41
CDY35503 Canola plasma membrane 47.1 48.91
Solyc12g044870.1.1 Tomato cytosol 10.01 48.8
CDY70443 Canola plasma membrane 46.85 48.59
Bra023756.1-P Field mustard plasma membrane 46.85 48.59
Solyc06g036450.1.1 Tomato cytosol 5.93 48.0
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 45.74 47.87
Solyc09g082910.1.1 Tomato cytosol 9.77 47.59
Bra040134.1-P Field mustard plasma membrane 44.99 47.52
CDY30004 Canola plasma membrane 44.87 47.39
Solyc04g049990.1.1 Tomato cytosol 7.66 47.33
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 6.43 47.27
AT3G04580.1 Thale cress plasma membrane 44.75 47.26
TraesCS4A01G344200.1 Wheat cytosol, golgi, plasma membrane 17.31 45.75
Solyc11g065590.1.1 Tomato cytosol 5.07 45.56
CDY67999 Canola plasma membrane 34.73 45.4
Bra015303.1-P Field mustard endoplasmic reticulum 34.49 45.29
CDY70681 Canola endoplasmic reticulum 34.36 45.06
CDX86641 Canola endoplasmic reticulum 33.13 45.04
PGSC0003DMT400044244 Potato plasma membrane 41.53 44.62
Solyc09g089610.2.1 Tomato endoplasmic reticulum 41.04 44.03
AT1G04310.1 Thale cress endoplasmic reticulum 34.61 43.41
TraesCS6A01G329400.1 Wheat plasma membrane 37.45 41.51
TraesCS6A01G285800.1 Wheat plasma membrane 37.21 41.35
Solyc01g014770.1.1 Tomato cytosol 6.8 41.04
Solyc09g065310.1.1 Tomato cytosol 3.21 40.62
Solyc12g038690.1.1 Tomato cytosol 3.21 40.62
Solyc09g011680.1.1 Tomato cytosol 5.07 39.42
Solyc04g025660.1.1 Tomato cytosol 4.94 38.46
Solyc04g064840.1.1 Tomato endoplasmic reticulum 8.41 37.57
TraesCS5A01G002600.1 Wheat cytosol, plasma membrane, vacuole 29.17 37.28
TraesCS4A01G274300.1 Wheat cytosol, golgi, plasma membrane 28.8 36.69
CDY64702 Canola mitochondrion 5.93 36.64
Solyc12g062760.1.1 Tomato cytosol 3.96 36.36
TraesCS1A01G096600.1 Wheat cytosol, golgi, plasma membrane 28.31 35.89
KRH31729 Soybean endoplasmic reticulum 10.51 35.56
Solyc08g068360.1.1 Tomato cytosol 5.07 34.17
CDY21123 Canola cytosol 12.61 34.0
Solyc12g027610.1.1 Tomato cytosol 8.16 33.85
Bra030564.1-P Field mustard plasma membrane 39.06 18.78
CDY15498 Canola plasma membrane 38.94 18.42
TraesCS4A01G264800.1 Wheat cytosol, peroxisome, plasma membrane 16.19 13.11
TraesCS6A01G312500.2 Wheat cytosol 15.7 12.87
TraesCS3A01G433200.1 Wheat peroxisome 15.7 12.66
TraesCS2A01G472800.2 Wheat nucleus 8.41 11.31
TraesCS7A01G498200.2 Wheat nucleus 13.23 11.05
TraesCS4A01G340900.1 Wheat endoplasmic reticulum, golgi 8.65 9.54
TraesCS7A01G146600.1 Wheat plasma membrane 10.88 8.14
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300InterPro:CheY-like_superfamily
ncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160
GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0038023GO:GO:0038199GO:GO:0050896GO:GO:0051740InterPro:HATPase_C_sfInterPro:HisK_dim/P
InterPro:HisK_dim/P_sfInterPro:IPR001789InterPro:IPR029016InterPro:IPR036890PFAM:PF00072PFAM:PF00512
PFAM:PF01590PIRSF:PIRSF026389PFscan:PS50110PANTHER:PTHR43719PANTHER:PTHR43719:SF21SMART:SM00065
SMART:SM00388SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874
InterPro:Sig_transdc_resp-reg_receiverTMHMM:TMhelixEnsemblPlantsGene:TraesCS6A01G399400EnsemblPlants:TraesCS6A01G399400.2TIGR:cd00082TIGR:cd00156
SEG:seg:::::
Description
No Description!
Coordinates
chr6A:+:609285698..609288266
Molecular Weight (calculated)
89321.4 Da
IEP (calculated)
7.816
GRAVY (calculated)
0.141
Length
809 amino acids
Sequence
(BLAST)
001: MVCPRFCLLP RQLGPICLSL TRLHLAQLDW MVPPRFRCGA GARRRLAPLL LLLALAPAAV AAVGGDVEYP HCSCDGGGGG GFWSMDNIFR WQKVSDLLIA
101: AAYFSIPLEI LYFVAGLRHL LPFRWVLVQF GAFIVLCGLT HLLAAFTYEP HPFVLVLLLT VAKFLTALVS FLTAITLLTL IPQLLRVKVR ESLLWIKARE
201: LDREVDLMKQ QEEASWHVRM LTQEIRKSLD RHTVLYTTLI ELSRVLGLTN CAVWMPSAAA SDGKVTMHLT HELRRGGSDE GLVVIGVDDV DVVEVRRSDG
301: VKLLGPGSAL AAASGGGKED TGTVAAIRMP MLKVSDFKGG TPEVIQTSYA VLVLVPPADK TWGAHETEIV EVVADQVAVA LSHASLLEES QAMRDRLAEQ
401: NRELLQARRD TLMANEARDA FQRVMSQGMR RPIHSILGLV SVVQEDDLTP EQKLVVDTMG RTATVVSTLI NDVMEMSATN RERFPLETRP FQLHSMIRDA
501: ACVSRCLCDF RGFGFAVHVE NTLPNLVIGD ERRIFHVILH MVGNLISRID SGHVMFRVRA DDEVAEDTLG QRWDPWRPSY SSGYSSVKFV IGVKSQQSLG
601: PMIPPTGQFK RKPSGEGFDL RLSFSMCRKL VQMMRGNIWA VLDGQGLPES MTLVLRFQLQ PPAPLVSSST SGGSFERQYA SPSCQLTGLK ILLIDDDDIN
701: MVVARKLLEK LGCVVSSLPS GSGFLNSVGP SSGAYQVVLV NLEMTRVNAL DVAVRVQQYR SGRWPFVMAM TSEQNAWEKC AQSGINGILR KPVVMLEAKE
801: ELTRILQSA
Best Arabidopsis Sequence Match ( AT3G23150.2 )
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQV SFLTYLFLKF
601: LSLV
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.